Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHD6Q8TD26 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD6Q8TD26 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.74■□□□□ 0.11
CHD6Q8TD26 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.74■□□□□ 0.11
CHD6Q8TD26 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHD6Q8TD26 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD6Q8TD26 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD6Q8TD26 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD6Q8TD26 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD6Q8TD26 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD6Q8TD26 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD6Q8TD26 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 RPSAP52-203ENST00000622976 1023 ntBASIC15.74■□□□□ 0.11
CHD6Q8TD26 AC093677.2-201ENST00000600169 1863 ntBASIC15.73■□□□□ 0.11
CHD6Q8TD26 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CHD6Q8TD26 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.73■□□□□ 0.11
CHD6Q8TD26 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.73■□□□□ 0.11
CHD6Q8TD26 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.73■□□□□ 0.11
CHD6Q8TD26 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.73■□□□□ 0.11
CHD6Q8TD26 HLA-V-204ENST00000476601 1289 ntBASIC15.73■□□□□ 0.11
CHD6Q8TD26 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.73■□□□□ 0.11
CHD6Q8TD26 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.73■□□□□ 0.11
CHD6Q8TD26 MIR5572-201ENST00000583188 137 ntBASIC15.73■□□□□ 0.11
CHD6Q8TD26 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.73■□□□□ 0.11
CHD6Q8TD26 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CHD6Q8TD26 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
CHD6Q8TD26 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.73■□□□□ 0.11
CHD6Q8TD26 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.73■□□□□ 0.11
CHD6Q8TD26 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.73■□□□□ 0.11
CHD6Q8TD26 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHD6Q8TD26 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.73■□□□□ 0.11
CHD6Q8TD26 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD6Q8TD26 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD6Q8TD26 IRX1P1-201ENST00000438849 1838 ntBASIC15.72■□□□□ 0.11
CHD6Q8TD26 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CHD6Q8TD26 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD6Q8TD26 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD6Q8TD26 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD6Q8TD26 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
CHD6Q8TD26 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD6Q8TD26 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.72■□□□□ 0.11
CHD6Q8TD26 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.72■□□□□ 0.11
CHD6Q8TD26 GNAQP1-201ENST00000444815 1067 ntBASIC15.72■□□□□ 0.11
CHD6Q8TD26 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.72■□□□□ 0.11
CHD6Q8TD26 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
CHD6Q8TD26 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.72■□□□□ 0.11
CHD6Q8TD26 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.72■□□□□ 0.11
CHD6Q8TD26 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD6Q8TD26 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.72■□□□□ 0.11
CHD6Q8TD26 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD6Q8TD26 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD6Q8TD26 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
CHD6Q8TD26 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHD6Q8TD26 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CHD6Q8TD26 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD6Q8TD26 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.72■□□□□ 0.11
CHD6Q8TD26 SPDYE12P-201ENST00000618416 771 ntBASIC15.72■□□□□ 0.11
CHD6Q8TD26 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.72■□□□□ 0.11
CHD6Q8TD26 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHD6Q8TD26 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHD6Q8TD26 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHD6Q8TD26 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHD6Q8TD26 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
CHD6Q8TD26 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHD6Q8TD26 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms