Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 AL139384.1-201ENST00000612143 3047 ntBASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 AC008894.3-201ENST00000624324 3103 ntBASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IL1Q8TBN0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 AC116562.2-201ENST00000507042 360 ntBASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 AC068587.6-202ENST00000641839 5619 ntBASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IL1Q8TBN0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3IL1Q8TBN0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms