Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 AC010654.1-201ENST00000615722 808 ntBASIC13.71□□□□□ -0.21
LINC01006Q8NI28 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 GPR89P-201ENST00000407924 1495 ntBASIC13.71□□□□□ -0.21
LINC01006Q8NI28 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LINC01006Q8NI28 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01006Q8NI28 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
LINC01006Q8NI28 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01006Q8NI28 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01006Q8NI28 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01006Q8NI28 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.71□□□□□ -0.22
LINC01006Q8NI28 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.71□□□□□ -0.22
LINC01006Q8NI28 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01006Q8NI28 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.71□□□□□ -0.22
LINC01006Q8NI28 AC009336.1-201ENST00000608941 1553 ntBASIC13.71□□□□□ -0.22
LINC01006Q8NI28 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 PTCHD3P3-201ENST00000403073 906 ntBASIC13.7□□□□□ -0.22
LINC01006Q8NI28 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 GGTLC5P-201ENST00000617623 998 ntBASIC13.7□□□□□ -0.22
LINC01006Q8NI28 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 AC135776.1-201ENST00000319817 2481 ntBASIC13.7□□□□□ -0.22
LINC01006Q8NI28 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01006Q8NI28 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 BCL2-203ENST00000589955 5011 ntBASIC13.69□□□□□ -0.22
LINC01006Q8NI28 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 WIZP1-201ENST00000531444 2299 ntBASIC13.69□□□□□ -0.22
LINC01006Q8NI28 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 IGLL3P-201ENST00000412472 434 ntBASIC13.69□□□□□ -0.22
LINC01006Q8NI28 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 AL078644.1-201ENST00000609881 752 ntBASIC13.69□□□□□ -0.22
LINC01006Q8NI28 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01006Q8NI28 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms