Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 RNA5SP419-201ENST00000515908 135 ntBASIC19.02■□□□□ 0.64
BEST2Q8NFU1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 AC064862.7-201ENST00000604520 867 ntBASIC19.02■□□□□ 0.64
BEST2Q8NFU1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BEST2Q8NFU1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
BEST2Q8NFU1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
BEST2Q8NFU1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
BEST2Q8NFU1 AL356309.3-201ENST00000624132 1934 ntBASIC19.02■□□□□ 0.63
BEST2Q8NFU1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
BEST2Q8NFU1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 SLC25A6P5-201ENST00000435663 894 ntBASIC19.01■□□□□ 0.63
BEST2Q8NFU1 AP000347.1-202ENST00000435868 847 ntBASIC19.01■□□□□ 0.63
BEST2Q8NFU1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 AC073592.5-201ENST00000624854 528 ntBASIC19.01■□□□□ 0.63
BEST2Q8NFU1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 AL049757.1-201ENST00000616842 1596 ntBASIC19.01■□□□□ 0.63
BEST2Q8NFU1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
BEST2Q8NFU1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
BEST2Q8NFU1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19■□□□□ 0.63
BEST2Q8NFU1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BEST2Q8NFU1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
BEST2Q8NFU1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BEST2Q8NFU1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BEST2Q8NFU1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BEST2Q8NFU1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19■□□□□ 0.63
BEST2Q8NFU1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19■□□□□ 0.63
BEST2Q8NFU1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
BEST2Q8NFU1 AF186996.4-201ENST00000467186 377 ntBASIC19■□□□□ 0.63
BEST2Q8NFU1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19■□□□□ 0.63
BEST2Q8NFU1 AC073648.2-201ENST00000510116 352 ntBASIC19■□□□□ 0.63
BEST2Q8NFU1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
BEST2Q8NFU1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
BEST2Q8NFU1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19■□□□□ 0.63
BEST2Q8NFU1 AC109462.3-201ENST00000573934 613 ntBASIC19■□□□□ 0.63
BEST2Q8NFU1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19■□□□□ 0.63
BEST2Q8NFU1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BEST2Q8NFU1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19■□□□□ 0.63
BEST2Q8NFU1 AC019129.2-201ENST00000609837 1235 ntBASIC19■□□□□ 0.63
BEST2Q8NFU1 AL139288.1-201ENST00000623748 933 ntBASIC19■□□□□ 0.63
BEST2Q8NFU1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19■□□□□ 0.63
BEST2Q8NFU1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BEST2Q8NFU1 AL353593.2-201ENST00000602529 1483 ntBASIC19■□□□□ 0.63
BEST2Q8NFU1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BEST2Q8NFU1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
BEST2Q8NFU1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19■□□□□ 0.63
BEST2Q8NFU1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BEST2Q8NFU1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19■□□□□ 0.63
BEST2Q8NFU1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
BEST2Q8NFU1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19■□□□□ 0.63
BEST2Q8NFU1 NEFHP1-201ENST00000412845 2629 ntBASIC19■□□□□ 0.63
BEST2Q8NFU1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
BEST2Q8NFU1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19■□□□□ 0.63
BEST2Q8NFU1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BEST2Q8NFU1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BEST2Q8NFU1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms