Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC112698.1-201ENST00000510299 916 ntBASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
SIMC1Q8NDZ2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SIMC1Q8NDZ2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 MTCL1P1-201ENST00000446207 792 ntBASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 AC091607.1-201ENST00000490318 1060 ntBASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 KRT8P26-201ENST00000534154 1276 ntBASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 MST1L-201ENST00000442552 2185 ntBASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIMC1Q8NDZ2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 SLC25A6P5-201ENST00000435663 894 ntBASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 AL592071.1-201ENST00000611956 408 ntBASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 AC124864.1-201ENST00000623408 392 ntBASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SIMC1Q8NDZ2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SIMC1Q8NDZ2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms