Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AC005593.1-201ENST00000624894 515 ntBASIC16.92■□□□□ 0.3
ZNF248Q8NDW4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF248Q8NDW4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF248Q8NDW4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ZNF248Q8NDW4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF248Q8NDW4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF248Q8NDW4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ZNF248Q8NDW4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF248Q8NDW4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.92■□□□□ 0.3
ZNF248Q8NDW4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF248Q8NDW4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF248Q8NDW4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF248Q8NDW4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ZNF248Q8NDW4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF248Q8NDW4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF248Q8NDW4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF248Q8NDW4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 MCCD1P2-201ENST00000423228 335 ntBASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 AC092364.2-202ENST00000597012 1073 ntBASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ZNF248Q8NDW4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.89■□□□□ 0.3
ZNF248Q8NDW4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.89■□□□□ 0.3
ZNF248Q8NDW4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.89■□□□□ 0.3
ZNF248Q8NDW4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 AC254562.1-201ENST00000417586 456 ntBASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.89■□□□□ 0.29
ZNF248Q8NDW4 AC006557.2-201ENST00000592985 1240 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms