Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.04■□□□□ 0.8
RETREG2Q8NC44 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 LINC00896-202ENST00000609602 2128 ntBASIC20.03■□□□□ 0.8
RETREG2Q8NC44 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RETREG2Q8NC44 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 BCL2-203ENST00000589955 5011 ntBASIC20.02■□□□□ 0.8
RETREG2Q8NC44 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 KRT18P65-201ENST00000439811 1286 ntBASIC20.02■□□□□ 0.8
RETREG2Q8NC44 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 AC009533.2-201ENST00000543664 586 ntBASIC20.02■□□□□ 0.8
RETREG2Q8NC44 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.02■□□□□ 0.8
RETREG2Q8NC44 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RETREG2Q8NC44 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RETREG2Q8NC44 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
RETREG2Q8NC44 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RETREG2Q8NC44 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RETREG2Q8NC44 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
RETREG2Q8NC44 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RETREG2Q8NC44 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RETREG2Q8NC44 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 FGFR3P6-201ENST00000457012 610 ntBASIC20.01■□□□□ 0.79
RETREG2Q8NC44 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 AL049840.3-201ENST00000602669 611 ntBASIC20.01■□□□□ 0.79
RETREG2Q8NC44 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 FAM215A-202ENST00000632077 792 ntBASIC20.01■□□□□ 0.79
RETREG2Q8NC44 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 AL096828.2-201ENST00000567259 1965 ntBASIC20.01■□□□□ 0.79
RETREG2Q8NC44 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RETREG2Q8NC44 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RETREG2Q8NC44 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RETREG2Q8NC44 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms