Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 MYCLP1-201ENST00000372451 1075 ntBASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 SLC25A24-204ENST00000569674 2357 ntBASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
COL27A1Q8IZC6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 AC140658.5-201ENST00000438532 169 ntBASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 COX20P2-201ENST00000452636 358 ntBASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 KRT8P48-201ENST00000515599 1220 ntBASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 AL390955.2-201ENST00000603032 514 ntBASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 AC116407.2-201ENST00000613639 860 ntBASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 AL135999.2-201ENST00000622438 1686 ntBASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL27A1Q8IZC6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 AJ011932.1-201ENST00000621707 465 ntBASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 Z92544.3-201ENST00000624747 417 ntBASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 AL020996.1-203ENST00000536896 2307 ntBASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
COL27A1Q8IZC6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms