Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 AL121672.3-201ENST00000608644 468 ntBASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC116Q8IYX3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 AC133963.1-201ENST00000504166 1679 ntBASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 AC016734.2-201ENST00000624325 1377 ntBASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 AC011840.4-201ENST00000578471 627 ntBASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC116Q8IYX3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 IER3-202ENST00000376377 1350 ntBASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 LINC00304-203ENST00000565008 1864 ntBASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 ARMC10P1-201ENST00000313754 855 ntBASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms