Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HERC6Q8IVU3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HERC6Q8IVU3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HERC6Q8IVU3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 NCF1C-201ENST00000438382 1427 ntBASIC19.09■□□□□ 0.65
HERC6Q8IVU3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 AC005082.1-201ENST00000413042 2259 ntBASIC19.09■□□□□ 0.65
HERC6Q8IVU3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC6Q8IVU3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
HERC6Q8IVU3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.08■□□□□ 0.65
HERC6Q8IVU3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HERC6Q8IVU3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
HERC6Q8IVU3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HERC6Q8IVU3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
HERC6Q8IVU3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.08■□□□□ 0.65
HERC6Q8IVU3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 IGLL3P-201ENST00000412472 434 ntBASIC19.08■□□□□ 0.64
HERC6Q8IVU3 TSEN15P1-201ENST00000423257 515 ntBASIC19.08■□□□□ 0.64
HERC6Q8IVU3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 PDPK2P-202ENST00000562415 1191 ntBASIC19.08■□□□□ 0.64
HERC6Q8IVU3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HERC6Q8IVU3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 COX5BP2-201ENST00000392354 334 ntBASIC19.07■□□□□ 0.64
HERC6Q8IVU3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HERC6Q8IVU3 GMCL1P1-201ENST00000463439 1581 ntBASIC19.06■□□□□ 0.64
HERC6Q8IVU3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HERC6Q8IVU3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms