Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 AC116353.5-201ENST00000638148 1699 ntBASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD2Q8IV50 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 NBPF21P-201ENST00000425093 1451 ntBASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 AC144831.1-201ENST00000573312 2656 ntBASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD2Q8IV50 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 RNF216P1-203ENST00000404404 2427 ntBASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD2Q8IV50 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD2Q8IV50 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms