Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 AL121912.1-201ENST00000603683 238 ntBASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 SIRPAP1-201ENST00000448467 1770 ntBASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 AP005117.1-201ENST00000584346 1413 ntBASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM4Q86VH4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 AC079781.3-201ENST00000449110 356 ntBASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 MTDHP3-201ENST00000594186 672 ntBASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 AL031008.1-201ENST00000619963 541 ntBASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 AL355877.3-201ENST00000622820 899 ntBASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM4Q86VH4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 AD001527.2-201ENST00000622994 785 ntBASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 AP000867.4-201ENST00000641616 219 ntBASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
LRRTM4Q86VH4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms