Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.83■□□□□ 0.44
RAPH1Q70E73 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAPH1Q70E73 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAPH1Q70E73 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 LINC01568-207ENST00000641790 1380 ntBASIC17.82■□□□□ 0.44
RAPH1Q70E73 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAPH1Q70E73 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAPH1Q70E73 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAPH1Q70E73 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAPH1Q70E73 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAPH1Q70E73 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAPH1Q70E73 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAPH1Q70E73 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAPH1Q70E73 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAPH1Q70E73 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAPH1Q70E73 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAPH1Q70E73 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAPH1Q70E73 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAPH1Q70E73 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAPH1Q70E73 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RAPH1Q70E73 LINC00167-201ENST00000530583 1419 ntBASIC17.81■□□□□ 0.44
RAPH1Q70E73 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
RAPH1Q70E73 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAPH1Q70E73 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAPH1Q70E73 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAPH1Q70E73 AC133963.1-201ENST00000504166 1679 ntBASIC17.81■□□□□ 0.44
RAPH1Q70E73 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAPH1Q70E73 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAPH1Q70E73 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
RAPH1Q70E73 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAPH1Q70E73 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.81■□□□□ 0.44
RAPH1Q70E73 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.81■□□□□ 0.44
RAPH1Q70E73 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
RAPH1Q70E73 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAPH1Q70E73 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAPH1Q70E73 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.81■□□□□ 0.44
RAPH1Q70E73 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAPH1Q70E73 ECEL1P3-201ENST00000427961 737 ntBASIC17.81■□□□□ 0.44
RAPH1Q70E73 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.81■□□□□ 0.44
RAPH1Q70E73 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.81■□□□□ 0.44
RAPH1Q70E73 AC116407.2-201ENST00000613639 860 ntBASIC17.81■□□□□ 0.44
RAPH1Q70E73 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RAPH1Q70E73 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAPH1Q70E73 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAPH1Q70E73 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.81■□□□□ 0.44
RAPH1Q70E73 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAPH1Q70E73 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAPH1Q70E73 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAPH1Q70E73 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAPH1Q70E73 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAPH1Q70E73 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RAPH1Q70E73 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RAPH1Q70E73 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RAPH1Q70E73 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.8■□□□□ 0.44
RAPH1Q70E73 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RAPH1Q70E73 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.8■□□□□ 0.44
RAPH1Q70E73 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RAPH1Q70E73 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RAPH1Q70E73 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.8■□□□□ 0.44
RAPH1Q70E73 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RAPH1Q70E73 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.8■□□□□ 0.44
RAPH1Q70E73 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.8■□□□□ 0.44
RAPH1Q70E73 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RAPH1Q70E73 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RAPH1Q70E73 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.8■□□□□ 0.44
RAPH1Q70E73 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAPH1Q70E73 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms