Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 DUX4L17-201ENST00000557360 1267 ntBASIC14.63□□□□□ -0.07
VPS13CQ709C8 AF228730.6-201ENST00000641497 218 ntBASIC14.63□□□□□ -0.07
VPS13CQ709C8 AC084121.3-201ENST00000641716 218 ntBASIC14.63□□□□□ -0.07
VPS13CQ709C8 AC105233.6-201ENST00000642093 218 ntBASIC14.63□□□□□ -0.07
VPS13CQ709C8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13CQ709C8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS13CQ709C8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS13CQ709C8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13CQ709C8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS13CQ709C8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS13CQ709C8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13CQ709C8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS13CQ709C8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13CQ709C8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS13CQ709C8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13CQ709C8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS13CQ709C8 AC074386.1-202ENST00000463561 864 ntBASIC14.62□□□□□ -0.07
VPS13CQ709C8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13CQ709C8 AL008721.1-201ENST00000609964 604 ntBASIC14.62□□□□□ -0.07
VPS13CQ709C8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.62□□□□□ -0.07
VPS13CQ709C8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS13CQ709C8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13CQ709C8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS13CQ709C8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13CQ709C8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13CQ709C8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13CQ709C8 AC096734.2-201ENST00000562054 433 ntBASIC14.62□□□□□ -0.07
VPS13CQ709C8 PGM5P2-202ENST00000637225 1043 ntBASIC14.62□□□□□ -0.07
VPS13CQ709C8 AL353593.2-201ENST00000602529 1483 ntBASIC14.62□□□□□ -0.07
VPS13CQ709C8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS13CQ709C8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS13CQ709C8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13CQ709C8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13CQ709C8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13CQ709C8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
VPS13CQ709C8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13CQ709C8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.62□□□□□ -0.07
VPS13CQ709C8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13CQ709C8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13CQ709C8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.62□□□□□ -0.07
VPS13CQ709C8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
VPS13CQ709C8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.62□□□□□ -0.07
VPS13CQ709C8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS13CQ709C8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13CQ709C8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13CQ709C8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13CQ709C8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13CQ709C8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.61□□□□□ -0.07
VPS13CQ709C8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13CQ709C8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13CQ709C8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13CQ709C8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13CQ709C8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13CQ709C8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13CQ709C8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13CQ709C8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13CQ709C8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.61□□□□□ -0.07
VPS13CQ709C8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13CQ709C8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13CQ709C8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13CQ709C8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VPS13CQ709C8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS13CQ709C8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
VPS13CQ709C8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13CQ709C8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS13CQ709C8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS13CQ709C8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.6□□□□□ -0.07
VPS13CQ709C8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13CQ709C8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
VPS13CQ709C8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13CQ709C8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.6□□□□□ -0.07
VPS13CQ709C8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13CQ709C8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.6□□□□□ -0.07
VPS13CQ709C8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13CQ709C8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13CQ709C8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13CQ709C8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS13CQ709C8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS13CQ709C8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13CQ709C8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS13CQ709C8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.6□□□□□ -0.07
VPS13CQ709C8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.6□□□□□ -0.07
VPS13CQ709C8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.6□□□□□ -0.07
VPS13CQ709C8 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms