Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COLCA1Q6ZS62 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COLCA1Q6ZS62 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COLCA1Q6ZS62 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COLCA1Q6ZS62 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COLCA1Q6ZS62 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COLCA1Q6ZS62 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
COLCA1Q6ZS62 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 LYSMD4-203ENST00000378904 2122 ntBASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 AC139713.2-201ENST00000641328 2723 ntBASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 AC141586.5-201ENST00000624546 2050 ntBASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 MYCLP1-201ENST00000372451 1075 ntBASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
COLCA1Q6ZS62 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 BNIP3P18-201ENST00000593976 575 ntBASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 NSUN5P1-202ENST00000421140 1535 ntBASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 NSUN5P2-203ENST00000457352 1529 ntBASIC15.21■□□□□ 0.03
COLCA1Q6ZS62 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.21■□□□□ 0.02
COLCA1Q6ZS62 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
COLCA1Q6ZS62 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.21■□□□□ 0.02
COLCA1Q6ZS62 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
COLCA1Q6ZS62 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.21■□□□□ 0.02
COLCA1Q6ZS62 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 TP73-AS1-210ENST00000637775 1455 ntBASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 AC016396.2-201ENST00000562575 1417 ntBASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COLCA1Q6ZS62 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms