Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
FOXR1Q6PIV2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 PCDHB17P-201ENST00000539533 2393 ntBASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXR1Q6PIV2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 AC010653.2-201ENST00000623505 997 ntBASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 AP000550.4-202ENST00000639755 178 ntBASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
FOXR1Q6PIV2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 PCED1CP-201ENST00000419887 785 ntBASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 TSPY17P-201ENST00000450329 467 ntBASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 AL023973.1-201ENST00000624619 620 ntBASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 MYC-208ENST00000641036 567 ntBASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXR1Q6PIV2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms