Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 AL020989.1-201ENST00000422979 469 ntBASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 KRT18P3-201ENST00000451602 1288 ntBASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 AL139424.1-201ENST00000607572 797 ntBASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 AL589182.2-201ENST00000619332 1049 ntBASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC62Q6P9F0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 AC148477.5-201ENST00000625164 1645 ntBASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 AL138781.2-201ENST00000617896 1843 ntBASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CCDC62Q6P9F0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CCDC62Q6P9F0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC62Q6P9F0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC62Q6P9F0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC62Q6P9F0 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.83■□□□□ 0.76
CCDC62Q6P9F0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC62Q6P9F0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC62Q6P9F0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 AC009949.1-201ENST00000623048 1830 ntBASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 MIR1233-2-201ENST00000408138 82 ntBASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 MIR1233-1-201ENST00000408722 82 ntBASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 AC136632.2-201ENST00000512891 861 ntBASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC62Q6P9F0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms