Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LINC01556Q5JQF7 GNAS-203ENST00000306120 1878 ntBASIC12.04□□□□□ -0.48
LINC01556Q5JQF7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01556Q5JQF7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01556Q5JQF7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01556Q5JQF7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01556Q5JQF7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01556Q5JQF7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
LINC01556Q5JQF7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 NUS1P2-201ENST00000417358 873 ntBASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 FOSL1P1-201ENST00000511041 816 ntBASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 CLEC4GP1-201ENST00000596555 870 ntBASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 LINC01451-201ENST00000623792 534 ntBASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 NOC2LP2-201ENST00000407594 1944 ntBASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01556Q5JQF7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.02□□□□□ -0.48
LINC01556Q5JQF7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC12.02□□□□□ -0.48
LINC01556Q5JQF7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
LINC01556Q5JQF7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
LINC01556Q5JQF7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC01556Q5JQF7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
LINC01556Q5JQF7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.02□□□□□ -0.48
LINC01556Q5JQF7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC01556Q5JQF7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC12.02□□□□□ -0.48
LINC01556Q5JQF7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
LINC01556Q5JQF7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.02□□□□□ -0.48
LINC01556Q5JQF7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
LINC01556Q5JQF7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC01556Q5JQF7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC01556Q5JQF7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 INTS4P1-201ENST00000438455 1935 ntBASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 MYCLP1-201ENST00000372451 1075 ntBASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 AC005104.2-201ENST00000427818 678 ntBASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 AC002558.1-201ENST00000488906 803 ntBASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 AL591684.3-201ENST00000605187 298 ntBASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01556Q5JQF7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms