Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 AC116407.2-201ENST00000613639 860 ntBASIC17.24■□□□□ 0.35
SGO1Q5FBB7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SGO1Q5FBB7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 TSPY12P-201ENST00000421279 868 ntBASIC17.23■□□□□ 0.35
SGO1Q5FBB7 TSPY5P-201ENST00000426936 936 ntBASIC17.23■□□□□ 0.35
SGO1Q5FBB7 HLA-F-220ENST00000434407 884 ntBASIC17.23■□□□□ 0.35
SGO1Q5FBB7 KRT18P65-201ENST00000439811 1286 ntBASIC17.23■□□□□ 0.35
SGO1Q5FBB7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 KRT18P38-201ENST00000449496 1282 ntBASIC17.23■□□□□ 0.35
SGO1Q5FBB7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.23■□□□□ 0.35
SGO1Q5FBB7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 AC108860.2-201ENST00000562760 2183 ntBASIC17.22■□□□□ 0.35
SGO1Q5FBB7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 RNF152P1-201ENST00000397754 604 ntBASIC17.22■□□□□ 0.35
SGO1Q5FBB7 AK4P3-201ENST00000418260 669 ntBASIC17.22■□□□□ 0.35
SGO1Q5FBB7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SGO1Q5FBB7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SGO1Q5FBB7 KRT89P-201ENST00000620027 1478 ntBASIC17.21■□□□□ 0.35
SGO1Q5FBB7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms