Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDR1Q08345 MIR661-201ENST00000384842 89 ntBASIC21.81■■□□□ 1.08
DDR1Q08345 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDR1Q08345 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.81■■□□□ 1.08
DDR1Q08345 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.81■■□□□ 1.08
DDR1Q08345 TIMM8BP1-201ENST00000452384 211 ntBASIC21.81■■□□□ 1.08
DDR1Q08345 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDR1Q08345 IGHV3-52-201ENST00000519770 353 ntBASIC21.81■■□□□ 1.08
DDR1Q08345 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDR1Q08345 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.81■■□□□ 1.08
DDR1Q08345 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.81■■□□□ 1.08
DDR1Q08345 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDR1Q08345 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.81■■□□□ 1.08
DDR1Q08345 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.81■■□□□ 1.08
DDR1Q08345 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDR1Q08345 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
DDR1Q08345 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDR1Q08345 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.81■■□□□ 1.08
DDR1Q08345 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDR1Q08345 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.81■■□□□ 1.08
DDR1Q08345 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.81■■□□□ 1.08
DDR1Q08345 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDR1Q08345 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDR1Q08345 AL096828.2-201ENST00000567259 1965 ntBASIC21.81■■□□□ 1.08
DDR1Q08345 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDR1Q08345 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDR1Q08345 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.8■■□□□ 1.08
DDR1Q08345 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.8■■□□□ 1.08
DDR1Q08345 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.8■■□□□ 1.08
DDR1Q08345 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDR1Q08345 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDR1Q08345 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
DDR1Q08345 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDR1Q08345 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDR1Q08345 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.8■■□□□ 1.08
DDR1Q08345 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDR1Q08345 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.8■■□□□ 1.08
DDR1Q08345 AC093214.1-201ENST00000511688 1107 ntBASIC21.8■■□□□ 1.08
DDR1Q08345 KRT8P48-201ENST00000515599 1220 ntBASIC21.8■■□□□ 1.08
DDR1Q08345 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.8■■□□□ 1.08
DDR1Q08345 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.8■■□□□ 1.08
DDR1Q08345 AC190387.1-201ENST00000551683 408 ntBASIC21.8■■□□□ 1.08
DDR1Q08345 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.8■■□□□ 1.08
DDR1Q08345 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.8■■□□□ 1.08
DDR1Q08345 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDR1Q08345 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.8■■□□□ 1.08
DDR1Q08345 AC099522.2-201ENST00000607001 744 ntBASIC21.8■■□□□ 1.08
DDR1Q08345 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
DDR1Q08345 AL035252.4-201ENST00000624174 288 ntBASIC21.8■■□□□ 1.08
DDR1Q08345 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.8■■□□□ 1.08
DDR1Q08345 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.8■■□□□ 1.08
DDR1Q08345 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDR1Q08345 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDR1Q08345 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDR1Q08345 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDR1Q08345 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DDR1Q08345 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDR1Q08345 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DDR1Q08345 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDR1Q08345 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
DDR1Q08345 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.79■■□□□ 1.08
DDR1Q08345 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.79■■□□□ 1.08
DDR1Q08345 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.79■■□□□ 1.08
DDR1Q08345 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.79■■□□□ 1.08
DDR1Q08345 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.79■■□□□ 1.08
DDR1Q08345 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDR1Q08345 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.79■■□□□ 1.08
DDR1Q08345 AC112191.1-201ENST00000523689 701 ntBASIC21.79■■□□□ 1.08
DDR1Q08345 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.79■■□□□ 1.08
DDR1Q08345 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDR1Q08345 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDR1Q08345 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDR1Q08345 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.79■■□□□ 1.08
DDR1Q08345 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.79■■□□□ 1.08
DDR1Q08345 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DDR1Q08345 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DDR1Q08345 BX276092.7-203ENST00000637198 1536 ntBASIC21.79■■□□□ 1.08
DDR1Q08345 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDR1Q08345 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.79■■□□□ 1.08
DDR1Q08345 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
DDR1Q08345 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDR1Q08345 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
DDR1Q08345 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.79■■□□□ 1.08
DDR1Q08345 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDR1Q08345 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDR1Q08345 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDR1Q08345 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDR1Q08345 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.78■■□□□ 1.08
DDR1Q08345 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDR1Q08345 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDR1Q08345 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.78■■□□□ 1.08
DDR1Q08345 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.78■■□□□ 1.08
DDR1Q08345 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.78■■□□□ 1.08
DDR1Q08345 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
DDR1Q08345 AL355306.1-201ENST00000415580 579 ntBASIC21.78■■□□□ 1.08
DDR1Q08345 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDR1Q08345 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDR1Q08345 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.78■■□□□ 1.08
DDR1Q08345 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.78■■□□□ 1.08
DDR1Q08345 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms