Protein–RNA interactions for Protein: Q06455

RUNX1T1, Protein CBFA2T1, humanhuman

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1Q06455 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RUNX1T1Q06455 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RUNX1T1Q06455 AL139384.1-201ENST00000612143 3047 ntBASIC16.4■□□□□ 0.22
RUNX1T1Q06455 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 AC128688.1-201ENST00000487626 519 ntBASIC16.4■□□□□ 0.22
RUNX1T1Q06455 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RUNX1T1Q06455 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RUNX1T1Q06455 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RUNX1T1Q06455 NKILA-202ENST00000614771 2598 ntBASIC16.39■□□□□ 0.22
RUNX1T1Q06455 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 AL023806.1-201ENST00000603994 1649 ntBASIC16.39■□□□□ 0.21
RUNX1T1Q06455 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 AC112497.1-201ENST00000624824 639 ntBASIC16.39■□□□□ 0.21
RUNX1T1Q06455 AL590326.2-201ENST00000625139 305 ntBASIC16.39■□□□□ 0.21
RUNX1T1Q06455 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.39■□□□□ 0.21
RUNX1T1Q06455 LINC01568-207ENST00000641790 1380 ntBASIC16.38■□□□□ 0.21
RUNX1T1Q06455 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
RUNX1T1Q06455 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RUNX1T1Q06455 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
RUNX1T1Q06455 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RUNX1T1Q06455 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RUNX1T1Q06455 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNX1T1Q06455 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RUNX1T1Q06455 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.38■□□□□ 0.21
RUNX1T1Q06455 AC011676.5-201ENST00000624864 2660 ntBASIC16.38■□□□□ 0.21
RUNX1T1Q06455 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNX1T1Q06455 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNX1T1Q06455 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNX1T1Q06455 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.38■□□□□ 0.21
RUNX1T1Q06455 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNX1T1Q06455 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RUNX1T1Q06455 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms