Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3P56703 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3P56703 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3P56703 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.75■□□□□ 0.27
WNT3P56703 MTCL1P1-201ENST00000446207 792 ntBASIC16.75■□□□□ 0.27
WNT3P56703 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.75■□□□□ 0.27
WNT3P56703 AP003733.1-201ENST00000491725 852 ntBASIC16.75■□□□□ 0.27
WNT3P56703 VENTXP5-201ENST00000523979 775 ntBASIC16.75■□□□□ 0.27
WNT3P56703 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.75■□□□□ 0.27
WNT3P56703 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
WNT3P56703 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.75■□□□□ 0.27
WNT3P56703 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
WNT3P56703 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
WNT3P56703 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3P56703 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3P56703 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3P56703 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3P56703 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3P56703 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3P56703 LYSMD4-203ENST00000378904 2122 ntBASIC16.75■□□□□ 0.27
WNT3P56703 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3P56703 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3P56703 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3P56703 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3P56703 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
WNT3P56703 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3P56703 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.74■□□□□ 0.27
WNT3P56703 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3P56703 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3P56703 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3P56703 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3P56703 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3P56703 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.74■□□□□ 0.27
WNT3P56703 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3P56703 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
WNT3P56703 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.74■□□□□ 0.27
WNT3P56703 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.74■□□□□ 0.27
WNT3P56703 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.74■□□□□ 0.27
WNT3P56703 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.74■□□□□ 0.27
WNT3P56703 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.74■□□□□ 0.27
WNT3P56703 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.74■□□□□ 0.27
WNT3P56703 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.74■□□□□ 0.27
WNT3P56703 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3P56703 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3P56703 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3P56703 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3P56703 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
WNT3P56703 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
WNT3P56703 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
WNT3P56703 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
WNT3P56703 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
WNT3P56703 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.73■□□□□ 0.27
WNT3P56703 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.73■□□□□ 0.27
WNT3P56703 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
WNT3P56703 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
WNT3P56703 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.73■□□□□ 0.27
WNT3P56703 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.73■□□□□ 0.27
WNT3P56703 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
WNT3P56703 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
WNT3P56703 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
WNT3P56703 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.73■□□□□ 0.27
WNT3P56703 SPDYE13P-201ENST00000445314 798 ntBASIC16.73■□□□□ 0.27
WNT3P56703 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.73■□□□□ 0.27
WNT3P56703 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
WNT3P56703 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
WNT3P56703 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.73■□□□□ 0.27
WNT3P56703 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.73■□□□□ 0.27
WNT3P56703 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.73■□□□□ 0.27
WNT3P56703 ZNF444P1-201ENST00000559497 298 ntBASIC16.73■□□□□ 0.27
WNT3P56703 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.73■□□□□ 0.27
WNT3P56703 GPR32P1-201ENST00000601788 811 ntBASIC16.73■□□□□ 0.27
WNT3P56703 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
WNT3P56703 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.73■□□□□ 0.27
WNT3P56703 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
WNT3P56703 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.73■□□□□ 0.27
WNT3P56703 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.73■□□□□ 0.27
WNT3P56703 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
WNT3P56703 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
WNT3P56703 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.73■□□□□ 0.27
WNT3P56703 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.73■□□□□ 0.27
WNT3P56703 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
WNT3P56703 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
WNT3P56703 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
WNT3P56703 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.73■□□□□ 0.27
WNT3P56703 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
WNT3P56703 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.72■□□□□ 0.27
WNT3P56703 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.72■□□□□ 0.27
WNT3P56703 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
WNT3P56703 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.72■□□□□ 0.27
WNT3P56703 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
WNT3P56703 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
WNT3P56703 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.72■□□□□ 0.27
WNT3P56703 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
WNT3P56703 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
WNT3P56703 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.72■□□□□ 0.27
WNT3P56703 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
WNT3P56703 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
WNT3P56703 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
WNT3P56703 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.72■□□□□ 0.27
WNT3P56703 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms