Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S2P56377 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.24■□□□□ 0.35
AP1S2P56377 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
AP1S2P56377 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.24■□□□□ 0.35
AP1S2P56377 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S2P56377 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S2P56377 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
AP1S2P56377 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S2P56377 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
AP1S2P56377 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
AP1S2P56377 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.23■□□□□ 0.35
AP1S2P56377 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.23■□□□□ 0.35
AP1S2P56377 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
AP1S2P56377 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
AP1S2P56377 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.23■□□□□ 0.35
AP1S2P56377 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
AP1S2P56377 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.23■□□□□ 0.35
AP1S2P56377 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.23■□□□□ 0.35
AP1S2P56377 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 AC002558.1-201ENST00000488906 803 ntBASIC17.23■□□□□ 0.35
AP1S2P56377 KRT18P35-201ENST00000510488 1269 ntBASIC17.23■□□□□ 0.35
AP1S2P56377 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.23■□□□□ 0.35
AP1S2P56377 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.23■□□□□ 0.35
AP1S2P56377 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.23■□□□□ 0.35
AP1S2P56377 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.23■□□□□ 0.35
AP1S2P56377 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.23■□□□□ 0.35
AP1S2P56377 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.23■□□□□ 0.35
AP1S2P56377 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
AP1S2P56377 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.23■□□□□ 0.35
AP1S2P56377 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 AC010460.3-201ENST00000511359 1579 ntBASIC17.23■□□□□ 0.35
AP1S2P56377 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
AP1S2P56377 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.23■□□□□ 0.35
AP1S2P56377 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S2P56377 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
AP1S2P56377 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
AP1S2P56377 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.22■□□□□ 0.35
AP1S2P56377 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
AP1S2P56377 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 AC007967.3-201ENST00000434308 558 ntBASIC17.22■□□□□ 0.35
AP1S2P56377 DRAXINP1-201ENST00000437611 948 ntBASIC17.22■□□□□ 0.35
AP1S2P56377 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.22■□□□□ 0.35
AP1S2P56377 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.22■□□□□ 0.35
AP1S2P56377 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.22■□□□□ 0.35
AP1S2P56377 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 AC005336.2-201ENST00000593183 939 ntBASIC17.22■□□□□ 0.35
AP1S2P56377 AC091076.1-201ENST00000610741 619 ntBASIC17.22■□□□□ 0.35
AP1S2P56377 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.22■□□□□ 0.35
AP1S2P56377 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.22■□□□□ 0.35
AP1S2P56377 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
AP1S2P56377 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S2P56377 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S2P56377 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.21■□□□□ 0.35
AP1S2P56377 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.21■□□□□ 0.35
AP1S2P56377 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S2P56377 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.21■□□□□ 0.35
AP1S2P56377 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S2P56377 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S2P56377 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
AP1S2P56377 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S2P56377 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S2P56377 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S2P56377 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
AP1S2P56377 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S2P56377 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S2P56377 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S2P56377 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S2P56377 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms