Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH8P55286 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH8P55286 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH8P55286 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH8P55286 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH8P55286 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH8P55286 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.88■□□□□ 0.61
CDH8P55286 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH8P55286 AC122714.2-201ENST00000502787 707 ntBASIC18.88■□□□□ 0.61
CDH8P55286 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.88■□□□□ 0.61
CDH8P55286 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDH8P55286 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
CDH8P55286 AC005332.8-201ENST00000622750 2735 ntBASIC18.88■□□□□ 0.61
CDH8P55286 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.88■□□□□ 0.61
CDH8P55286 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH8P55286 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH8P55286 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH8P55286 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH8P55286 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH8P55286 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH8P55286 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH8P55286 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH8P55286 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH8P55286 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH8P55286 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH8P55286 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH8P55286 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH8P55286 AKR1C7P-201ENST00000305623 895 ntBASIC18.87■□□□□ 0.61
CDH8P55286 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CDH8P55286 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH8P55286 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.87■□□□□ 0.61
CDH8P55286 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH8P55286 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH8P55286 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH8P55286 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.87■□□□□ 0.61
CDH8P55286 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH8P55286 EMBP1-201ENST00000458200 901 ntBASIC18.87■□□□□ 0.61
CDH8P55286 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CDH8P55286 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.87■□□□□ 0.61
CDH8P55286 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH8P55286 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
CDH8P55286 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.87■□□□□ 0.61
CDH8P55286 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CDH8P55286 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CDH8P55286 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.87■□□□□ 0.61
CDH8P55286 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.87■□□□□ 0.61
CDH8P55286 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CDH8P55286 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH8P55286 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH8P55286 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CDH8P55286 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CDH8P55286 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CDH8P55286 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH8P55286 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH8P55286 AL049757.1-201ENST00000616842 1596 ntBASIC18.86■□□□□ 0.61
CDH8P55286 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CDH8P55286 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH8P55286 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.86■□□□□ 0.61
CDH8P55286 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH8P55286 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH8P55286 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CDH8P55286 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH8P55286 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH8P55286 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.86■□□□□ 0.61
CDH8P55286 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.86■□□□□ 0.61
CDH8P55286 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH8P55286 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.86■□□□□ 0.61
CDH8P55286 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH8P55286 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.86■□□□□ 0.61
CDH8P55286 AP001269.4-201ENST00000609611 512 ntBASIC18.86■□□□□ 0.61
CDH8P55286 AC019129.2-201ENST00000609837 1235 ntBASIC18.86■□□□□ 0.61
CDH8P55286 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH8P55286 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH8P55286 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH8P55286 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH8P55286 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH8P55286 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CDH8P55286 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CDH8P55286 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CDH8P55286 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CDH8P55286 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH8P55286 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH8P55286 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH8P55286 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH8P55286 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH8P55286 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH8P55286 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH8P55286 KRT8P10-201ENST00000450021 1447 ntBASIC18.85■□□□□ 0.61
CDH8P55286 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CDH8P55286 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH8P55286 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CDH8P55286 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH8P55286 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CDH8P55286 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH8P55286 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH8P55286 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH8P55286 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH8P55286 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH8P55286 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH8P55286 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms