Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.6■■□□□ 1.05
PDE1AP54750 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.6■■□□□ 1.05
PDE1AP54750 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE1AP54750 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.6■■□□□ 1.05
PDE1AP54750 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
PDE1AP54750 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDE1AP54750 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE1AP54750 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDE1AP54750 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.59■■□□□ 1.05
PDE1AP54750 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDE1AP54750 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDE1AP54750 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.59■■□□□ 1.05
PDE1AP54750 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.59■■□□□ 1.05
PDE1AP54750 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDE1AP54750 TOB2P1-201ENST00000469761 992 ntBASIC21.59■■□□□ 1.05
PDE1AP54750 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.59■■□□□ 1.05
PDE1AP54750 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDE1AP54750 AC122714.2-201ENST00000502787 707 ntBASIC21.59■■□□□ 1.05
PDE1AP54750 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDE1AP54750 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
PDE1AP54750 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.59■■□□□ 1.05
PDE1AP54750 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDE1AP54750 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDE1AP54750 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.59■■□□□ 1.05
PDE1AP54750 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDE1AP54750 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.59■■□□□ 1.05
PDE1AP54750 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PDE1AP54750 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDE1AP54750 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDE1AP54750 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.59■■□□□ 1.05
PDE1AP54750 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.59■■□□□ 1.05
PDE1AP54750 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDE1AP54750 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDE1AP54750 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
PDE1AP54750 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.59■■□□□ 1.05
PDE1AP54750 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.58■■□□□ 1.05
PDE1AP54750 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.58■■□□□ 1.05
PDE1AP54750 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.58■■□□□ 1.05
PDE1AP54750 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDE1AP54750 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDE1AP54750 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.58■■□□□ 1.05
PDE1AP54750 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDE1AP54750 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDE1AP54750 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PDE1AP54750 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.58■■□□□ 1.05
PDE1AP54750 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDE1AP54750 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.58■■□□□ 1.05
PDE1AP54750 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.58■■□□□ 1.05
PDE1AP54750 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDE1AP54750 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.58■■□□□ 1.05
PDE1AP54750 AC069148.1-201ENST00000608741 768 ntBASIC21.58■■□□□ 1.05
PDE1AP54750 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
PDE1AP54750 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDE1AP54750 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDE1AP54750 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
PDE1AP54750 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDE1AP54750 AL023806.1-201ENST00000603994 1649 ntBASIC21.58■■□□□ 1.04
PDE1AP54750 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.58■■□□□ 1.04
PDE1AP54750 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE1AP54750 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.57■■□□□ 1.04
PDE1AP54750 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.57■■□□□ 1.04
PDE1AP54750 AL049757.1-201ENST00000616842 1596 ntBASIC21.57■■□□□ 1.04
PDE1AP54750 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE1AP54750 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDE1AP54750 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.57■■□□□ 1.04
PDE1AP54750 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE1AP54750 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.57■■□□□ 1.04
PDE1AP54750 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PDE1AP54750 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE1AP54750 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE1AP54750 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.57■■□□□ 1.04
PDE1AP54750 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.57■■□□□ 1.04
PDE1AP54750 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.57■■□□□ 1.04
PDE1AP54750 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
PDE1AP54750 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.57■■□□□ 1.04
PDE1AP54750 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDE1AP54750 IGHV3-47-201ENST00000425060 335 ntBASIC21.57■■□□□ 1.04
PDE1AP54750 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.57■■□□□ 1.04
PDE1AP54750 VENTXP7-201ENST00000475503 772 ntBASIC21.57■■□□□ 1.04
PDE1AP54750 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.57■■□□□ 1.04
PDE1AP54750 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.57■■□□□ 1.04
PDE1AP54750 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.57■■□□□ 1.04
PDE1AP54750 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
PDE1AP54750 AL139327.4-201ENST00000612362 153 ntBASIC21.57■■□□□ 1.04
PDE1AP54750 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE1AP54750 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE1AP54750 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE1AP54750 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE1AP54750 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE1AP54750 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PDE1AP54750 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.57■■□□□ 1.04
PDE1AP54750 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE1AP54750 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.56■■□□□ 1.04
PDE1AP54750 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDE1AP54750 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.56■■□□□ 1.04
PDE1AP54750 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE1AP54750 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDE1AP54750 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PDE1AP54750 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDE1AP54750 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms