Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.86■■□□□ 1.09
NUP98P52948 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.86■■□□□ 1.09
NUP98P52948 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.86■■□□□ 1.09
NUP98P52948 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NUP98P52948 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
NUP98P52948 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NUP98P52948 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.86■■□□□ 1.09
NUP98P52948 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NUP98P52948 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.86■■□□□ 1.09
NUP98P52948 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.85■■□□□ 1.09
NUP98P52948 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.85■■□□□ 1.09
NUP98P52948 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
NUP98P52948 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NUP98P52948 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
NUP98P52948 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.85■■□□□ 1.09
NUP98P52948 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
NUP98P52948 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
NUP98P52948 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.85■■□□□ 1.09
NUP98P52948 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.85■■□□□ 1.09
NUP98P52948 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.85■■□□□ 1.09
NUP98P52948 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.85■■□□□ 1.09
NUP98P52948 AC092902.6-201ENST00000641783 218 ntBASIC21.85■■□□□ 1.09
NUP98P52948 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.85■■□□□ 1.09
NUP98P52948 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
NUP98P52948 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NUP98P52948 AL135999.2-201ENST00000622438 1686 ntBASIC21.85■■□□□ 1.09
NUP98P52948 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NUP98P52948 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NUP98P52948 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.85■■□□□ 1.09
NUP98P52948 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.85■■□□□ 1.09
NUP98P52948 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NUP98P52948 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NUP98P52948 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.85■■□□□ 1.09
NUP98P52948 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.85■■□□□ 1.09
NUP98P52948 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NUP98P52948 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NUP98P52948 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.85■■□□□ 1.09
NUP98P52948 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.85■■□□□ 1.09
NUP98P52948 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.85■■□□□ 1.09
NUP98P52948 AC007064.4-201ENST00000637740 555 ntBASIC21.85■■□□□ 1.09
NUP98P52948 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
NUP98P52948 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.85■■□□□ 1.09
NUP98P52948 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.84■■□□□ 1.09
NUP98P52948 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
NUP98P52948 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
NUP98P52948 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NUP98P52948 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
NUP98P52948 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.84■■□□□ 1.09
NUP98P52948 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.84■■□□□ 1.09
NUP98P52948 PAWRP1-201ENST00000451083 565 ntBASIC21.84■■□□□ 1.09
NUP98P52948 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NUP98P52948 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NUP98P52948 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
NUP98P52948 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NUP98P52948 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
NUP98P52948 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NUP98P52948 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NUP98P52948 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.83■■□□□ 1.09
NUP98P52948 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NUP98P52948 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.83■■□□□ 1.09
NUP98P52948 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
NUP98P52948 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.83■■□□□ 1.09
NUP98P52948 AC091812.2-201ENST00000619081 385 ntBASIC21.83■■□□□ 1.09
NUP98P52948 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NUP98P52948 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NUP98P52948 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NUP98P52948 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.83■■□□□ 1.09
NUP98P52948 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NUP98P52948 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.83■■□□□ 1.08
NUP98P52948 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NUP98P52948 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NUP98P52948 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.83■■□□□ 1.08
NUP98P52948 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
NUP98P52948 RFPL4AP1-201ENST00000530883 850 ntBASIC21.83■■□□□ 1.08
NUP98P52948 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.83■■□□□ 1.08
NUP98P52948 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.83■■□□□ 1.08
NUP98P52948 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NUP98P52948 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NUP98P52948 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NUP98P52948 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
NUP98P52948 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
NUP98P52948 BCAR1-209ENST00000546196 1340 ntBASIC21.82■■□□□ 1.08
NUP98P52948 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NUP98P52948 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NUP98P52948 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NUP98P52948 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NUP98P52948 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NUP98P52948 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.82■■□□□ 1.08
NUP98P52948 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.82■■□□□ 1.08
NUP98P52948 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.82■■□□□ 1.08
NUP98P52948 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.82■■□□□ 1.08
NUP98P52948 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.82■■□□□ 1.08
NUP98P52948 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.82■■□□□ 1.08
NUP98P52948 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NUP98P52948 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.82■■□□□ 1.08
NUP98P52948 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NUP98P52948 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NUP98P52948 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NUP98P52948 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
NUP98P52948 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms