Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPT1AP50416 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPT1AP50416 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CPT1AP50416 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPT1AP50416 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPT1AP50416 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPT1AP50416 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
CPT1AP50416 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.52■□□□□ 0.72
CPT1AP50416 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.52■□□□□ 0.72
CPT1AP50416 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPT1AP50416 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.52■□□□□ 0.72
CPT1AP50416 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.52■□□□□ 0.72
CPT1AP50416 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CPT1AP50416 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPT1AP50416 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CPT1AP50416 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CPT1AP50416 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CPT1AP50416 KRT18P28-201ENST00000453838 1332 ntBASIC19.51■□□□□ 0.71
CPT1AP50416 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CPT1AP50416 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPT1AP50416 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.51■□□□□ 0.71
CPT1AP50416 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPT1AP50416 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.51■□□□□ 0.71
CPT1AP50416 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPT1AP50416 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPT1AP50416 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPT1AP50416 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.51■□□□□ 0.71
CPT1AP50416 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPT1AP50416 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CPT1AP50416 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPT1AP50416 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPT1AP50416 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CPT1AP50416 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CPT1AP50416 IGLL3P-201ENST00000412472 434 ntBASIC19.51■□□□□ 0.71
CPT1AP50416 LINC00982-205ENST00000420957 435 ntBASIC19.51■□□□□ 0.71
CPT1AP50416 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.51■□□□□ 0.71
CPT1AP50416 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.51■□□□□ 0.71
CPT1AP50416 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
CPT1AP50416 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.51■□□□□ 0.71
CPT1AP50416 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPT1AP50416 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPT1AP50416 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.51■□□□□ 0.71
CPT1AP50416 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.51■□□□□ 0.71
CPT1AP50416 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.51■□□□□ 0.71
CPT1AP50416 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPT1AP50416 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPT1AP50416 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CPT1AP50416 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.51■□□□□ 0.71
CPT1AP50416 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPT1AP50416 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPT1AP50416 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CPT1AP50416 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPT1AP50416 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPT1AP50416 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPT1AP50416 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPT1AP50416 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CPT1AP50416 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPT1AP50416 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.5■□□□□ 0.71
CPT1AP50416 AC096734.2-201ENST00000562054 433 ntBASIC19.5■□□□□ 0.71
CPT1AP50416 PDPK2P-202ENST00000562415 1191 ntBASIC19.5■□□□□ 0.71
CPT1AP50416 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPT1AP50416 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.5■□□□□ 0.71
CPT1AP50416 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPT1AP50416 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.5■□□□□ 0.71
CPT1AP50416 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPT1AP50416 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
CPT1AP50416 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.5■□□□□ 0.71
CPT1AP50416 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPT1AP50416 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPT1AP50416 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.5■□□□□ 0.71
CPT1AP50416 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CPT1AP50416 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPT1AP50416 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPT1AP50416 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.49■□□□□ 0.71
CPT1AP50416 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPT1AP50416 RNF165-205ENST00000588679 2904 ntBASIC19.49■□□□□ 0.71
CPT1AP50416 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.49■□□□□ 0.71
CPT1AP50416 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CPT1AP50416 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPT1AP50416 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPT1AP50416 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPT1AP50416 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CPT1AP50416 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPT1AP50416 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.49■□□□□ 0.71
CPT1AP50416 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPT1AP50416 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPT1AP50416 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPT1AP50416 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.49■□□□□ 0.71
CPT1AP50416 METTL21AP1-201ENST00000438852 635 ntBASIC19.49■□□□□ 0.71
CPT1AP50416 AL078644.1-201ENST00000609881 752 ntBASIC19.49■□□□□ 0.71
CPT1AP50416 AC010507.1-201ENST00000633895 436 ntBASIC19.49■□□□□ 0.71
CPT1AP50416 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CPT1AP50416 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CPT1AP50416 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.49■□□□□ 0.71
CPT1AP50416 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CPT1AP50416 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPT1AP50416 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPT1AP50416 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.49■□□□□ 0.71
CPT1AP50416 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.49■□□□□ 0.71
CPT1AP50416 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms