Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CDC34P49427 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.02□□□□□ -0.17
CDC34P49427 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC34P49427 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
CDC34P49427 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CDC34P49427 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.01□□□□□ -0.17
CDC34P49427 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.01□□□□□ -0.17
CDC34P49427 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.01□□□□□ -0.17
CDC34P49427 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.01□□□□□ -0.17
CDC34P49427 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 AC036111.1-201ENST00000533973 1582 ntBASIC14.01□□□□□ -0.17
CDC34P49427 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CDC34P49427 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.01□□□□□ -0.17
CDC34P49427 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
CDC34P49427 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 AC022898.2-201ENST00000616822 1312 ntBASIC14.01□□□□□ -0.17
CDC34P49427 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CDC34P49427 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.01□□□□□ -0.17
CDC34P49427 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CDC34P49427 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CDC34P49427 AP002982.1-201ENST00000492365 877 ntBASIC14.01□□□□□ -0.17
CDC34P49427 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.01□□□□□ -0.17
CDC34P49427 AC098934.4-201ENST00000564127 592 ntBASIC14.01□□□□□ -0.17
CDC34P49427 AC026271.3-201ENST00000571884 352 ntBASIC14.01□□□□□ -0.17
CDC34P49427 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.01□□□□□ -0.17
CDC34P49427 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.01□□□□□ -0.17
CDC34P49427 LINC01451-201ENST00000623792 534 ntBASIC14.01□□□□□ -0.17
CDC34P49427 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.01□□□□□ -0.17
CDC34P49427 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
CDC34P49427 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.01□□□□□ -0.17
CDC34P49427 AL162727.3-201ENST00000635661 2787 ntBASIC14.01□□□□□ -0.17
CDC34P49427 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CDC34P49427 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CDC34P49427 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.01□□□□□ -0.17
CDC34P49427 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.01□□□□□ -0.17
CDC34P49427 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
CDC34P49427 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDC34P49427 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CDC34P49427 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14□□□□□ -0.17
CDC34P49427 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CDC34P49427 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CDC34P49427 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 AC026271.2-201ENST00000428091 497 ntBASIC14□□□□□ -0.17
CDC34P49427 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CDC34P49427 KSR1P1-201ENST00000446298 240 ntBASIC14□□□□□ -0.17
CDC34P49427 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14□□□□□ -0.17
CDC34P49427 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14□□□□□ -0.17
CDC34P49427 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDC34P49427 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14□□□□□ -0.17
CDC34P49427 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CDC34P49427 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14□□□□□ -0.17
CDC34P49427 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms