Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CX3CR1P49238 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.59■□□□□ 0.09
CX3CR1P49238 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CR1P49238 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CR1P49238 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CR1P49238 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.59■□□□□ 0.09
CX3CR1P49238 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.59■□□□□ 0.09
CX3CR1P49238 PP12613-201ENST00000424958 2230 ntBASIC15.59■□□□□ 0.09
CX3CR1P49238 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CR1P49238 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CX3CR1P49238 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CX3CR1P49238 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CX3CR1P49238 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.58■□□□□ 0.08
CX3CR1P49238 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CX3CR1P49238 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.58■□□□□ 0.08
CX3CR1P49238 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.58■□□□□ 0.08
CX3CR1P49238 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 AC009154.2-201ENST00000621177 724 ntBASIC15.58■□□□□ 0.08
CX3CR1P49238 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CX3CR1P49238 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.58■□□□□ 0.08
CX3CR1P49238 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
CX3CR1P49238 KRT8P47-201ENST00000604727 1398 ntBASIC15.58■□□□□ 0.08
CX3CR1P49238 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CX3CR1P49238 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CX3CR1P49238 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CX3CR1P49238 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.58■□□□□ 0.08
CX3CR1P49238 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.58■□□□□ 0.08
CX3CR1P49238 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.58■□□□□ 0.08
CX3CR1P49238 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CX3CR1P49238 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.57■□□□□ 0.08
CX3CR1P49238 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CX3CR1P49238 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CX3CR1P49238 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CX3CR1P49238 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CX3CR1P49238 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CX3CR1P49238 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CX3CR1P49238 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CX3CR1P49238 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.57■□□□□ 0.08
CX3CR1P49238 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CX3CR1P49238 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CX3CR1P49238 RNF152P1-201ENST00000397754 604 ntBASIC15.57■□□□□ 0.08
CX3CR1P49238 TSPY5P-201ENST00000426936 936 ntBASIC15.57■□□□□ 0.08
CX3CR1P49238 HOMER2P1-201ENST00000455653 964 ntBASIC15.57■□□□□ 0.08
CX3CR1P49238 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CX3CR1P49238 AL359075.1-203ENST00000462729 1002 ntBASIC15.57■□□□□ 0.08
CX3CR1P49238 AP003733.1-201ENST00000491725 852 ntBASIC15.57■□□□□ 0.08
CX3CR1P49238 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.57■□□□□ 0.08
CX3CR1P49238 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.57■□□□□ 0.08
CX3CR1P49238 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.57■□□□□ 0.08
CX3CR1P49238 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CX3CR1P49238 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CX3CR1P49238 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CX3CR1P49238 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CX3CR1P49238 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.57■□□□□ 0.08
CX3CR1P49238 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.57■□□□□ 0.08
CX3CR1P49238 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CX3CR1P49238 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CX3CR1P49238 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.57■□□□□ 0.08
CX3CR1P49238 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
CX3CR1P49238 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.57■□□□□ 0.08
CX3CR1P49238 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CX3CR1P49238 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CX3CR1P49238 LINC00304-203ENST00000565008 1864 ntBASIC15.57■□□□□ 0.08
CX3CR1P49238 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.56■□□□□ 0.08
CX3CR1P49238 AL645608.8-201ENST00000606034 2086 ntBASIC15.56■□□□□ 0.08
CX3CR1P49238 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CX3CR1P49238 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 FER1L4-210ENST00000615531 5998 ntBASIC15.56■□□□□ 0.08
CX3CR1P49238 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CX3CR1P49238 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.56■□□□□ 0.08
CX3CR1P49238 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.56■□□□□ 0.08
CX3CR1P49238 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CX3CR1P49238 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms