Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDX1P47902 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.5□□□□□ -0.09
CDX1P47902 SLC25A6P5-201ENST00000435663 894 ntBASIC14.5□□□□□ -0.09
CDX1P47902 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDX1P47902 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.5□□□□□ -0.09
CDX1P47902 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.5□□□□□ -0.09
CDX1P47902 AC034232.1-201ENST00000506026 1064 ntBASIC14.5□□□□□ -0.09
CDX1P47902 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.5□□□□□ -0.09
CDX1P47902 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDX1P47902 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDX1P47902 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDX1P47902 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.5□□□□□ -0.09
CDX1P47902 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDX1P47902 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CDX1P47902 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
CDX1P47902 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDX1P47902 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDX1P47902 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDX1P47902 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDX1P47902 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDX1P47902 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDX1P47902 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDX1P47902 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDX1P47902 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.5□□□□□ -0.09
CDX1P47902 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDX1P47902 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.5□□□□□ -0.09
CDX1P47902 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDX1P47902 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDX1P47902 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CDX1P47902 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.49□□□□□ -0.09
CDX1P47902 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.49□□□□□ -0.09
CDX1P47902 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CDX1P47902 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
CDX1P47902 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 AL031133.1-201ENST00000406807 723 ntBASIC14.49□□□□□ -0.09
CDX1P47902 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.49□□□□□ -0.09
CDX1P47902 AL359075.1-203ENST00000462729 1002 ntBASIC14.49□□□□□ -0.09
CDX1P47902 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.49□□□□□ -0.09
CDX1P47902 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CDX1P47902 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.49□□□□□ -0.09
CDX1P47902 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CDX1P47902 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.49□□□□□ -0.09
CDX1P47902 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.49□□□□□ -0.09
CDX1P47902 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
CDX1P47902 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.49□□□□□ -0.09
CDX1P47902 AC112497.1-201ENST00000624824 639 ntBASIC14.49□□□□□ -0.09
CDX1P47902 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.49□□□□□ -0.09
CDX1P47902 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDX1P47902 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDX1P47902 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.49□□□□□ -0.09
CDX1P47902 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.49□□□□□ -0.09
CDX1P47902 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDX1P47902 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDX1P47902 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.48□□□□□ -0.09
CDX1P47902 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CDX1P47902 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.48□□□□□ -0.09
CDX1P47902 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.48□□□□□ -0.09
CDX1P47902 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 MIR564-202ENST00000385049 94 ntBASIC14.48□□□□□ -0.09
CDX1P47902 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.48□□□□□ -0.09
CDX1P47902 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CDX1P47902 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.48□□□□□ -0.09
CDX1P47902 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.48□□□□□ -0.09
CDX1P47902 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.48□□□□□ -0.09
CDX1P47902 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.48□□□□□ -0.09
CDX1P47902 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.48□□□□□ -0.09
CDX1P47902 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
CDX1P47902 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CDX1P47902 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDX1P47902 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms