Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.29■□□□□ 0.04
CBX5P45973 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CBX5P45973 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CBX5P45973 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.28■□□□□ 0.04
CBX5P45973 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX5P45973 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX5P45973 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CBX5P45973 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CBX5P45973 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CBX5P45973 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX5P45973 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.28■□□□□ 0.04
CBX5P45973 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.28■□□□□ 0.04
CBX5P45973 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.28■□□□□ 0.04
CBX5P45973 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX5P45973 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.28■□□□□ 0.04
CBX5P45973 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.28■□□□□ 0.04
CBX5P45973 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX5P45973 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX5P45973 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.28■□□□□ 0.04
CBX5P45973 B3GAT3P1-201ENST00000471720 806 ntBASIC15.28■□□□□ 0.04
CBX5P45973 AC011506.1-201ENST00000474329 610 ntBASIC15.28■□□□□ 0.04
CBX5P45973 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.28■□□□□ 0.04
CBX5P45973 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX5P45973 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.28■□□□□ 0.04
CBX5P45973 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.28■□□□□ 0.04
CBX5P45973 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.28■□□□□ 0.04
CBX5P45973 AC073195.1-201ENST00000607241 877 ntBASIC15.28■□□□□ 0.04
CBX5P45973 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX5P45973 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX5P45973 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CBX5P45973 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX5P45973 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CBX5P45973 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
CBX5P45973 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CBX5P45973 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.28■□□□□ 0.04
CBX5P45973 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
CBX5P45973 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CBX5P45973 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CBX5P45973 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CBX5P45973 PCDH8P1-201ENST00000428983 2773 ntBASIC15.27■□□□□ 0.04
CBX5P45973 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.27■□□□□ 0.04
CBX5P45973 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.27■□□□□ 0.04
CBX5P45973 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.27■□□□□ 0.04
CBX5P45973 AL355312.1-201ENST00000407115 2176 ntBASIC15.27■□□□□ 0.04
CBX5P45973 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CBX5P45973 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.27■□□□□ 0.04
CBX5P45973 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.27■□□□□ 0.04
CBX5P45973 CA15P1-201ENST00000481698 905 ntBASIC15.27■□□□□ 0.04
CBX5P45973 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.27■□□□□ 0.04
CBX5P45973 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CBX5P45973 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
CBX5P45973 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CBX5P45973 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CBX5P45973 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.27■□□□□ 0.03
CBX5P45973 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CBX5P45973 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CBX5P45973 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CBX5P45973 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CBX5P45973 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.27■□□□□ 0.03
CBX5P45973 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CBX5P45973 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CBX5P45973 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CBX5P45973 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CBX5P45973 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CBX5P45973 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CBX5P45973 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CBX5P45973 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CBX5P45973 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.27■□□□□ 0.03
CBX5P45973 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CBX5P45973 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.27■□□□□ 0.03
CBX5P45973 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CBX5P45973 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CBX5P45973 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CBX5P45973 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CBX5P45973 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CBX5P45973 AC096733.2-201ENST00000609937 1394 ntBASIC15.26■□□□□ 0.03
CBX5P45973 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms