Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC140878.1-201ENST00000565277 250 ntBASIC19.71■□□□□ 0.75
HTTP42858 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTTP42858 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.71■□□□□ 0.75
HTTP42858 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HTTP42858 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HTTP42858 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HTTP42858 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTTP42858 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HTTP42858 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HTTP42858 MIR1909-201ENST00000411312 80 ntBASIC19.71■□□□□ 0.75
HTTP42858 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.71■□□□□ 0.75
HTTP42858 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
HTTP42858 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HTTP42858 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTTP42858 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.7■□□□□ 0.74
HTTP42858 AC097493.3-201ENST00000509725 367 ntBASIC19.7■□□□□ 0.74
HTTP42858 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.7■□□□□ 0.74
HTTP42858 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.7■□□□□ 0.74
HTTP42858 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTTP42858 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.7■□□□□ 0.74
HTTP42858 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTTP42858 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTTP42858 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTTP42858 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.7■□□□□ 0.74
HTTP42858 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.7■□□□□ 0.74
HTTP42858 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.7■□□□□ 0.74
HTTP42858 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HTTP42858 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTTP42858 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.7■□□□□ 0.74
HTTP42858 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.7■□□□□ 0.74
HTTP42858 AC140658.5-201ENST00000438532 169 ntBASIC19.7■□□□□ 0.74
HTTP42858 RN7SL589P-201ENST00000481268 310 ntBASIC19.7■□□□□ 0.74
HTTP42858 SLC25A39P2-201ENST00000537614 270 ntBASIC19.7■□□□□ 0.74
HTTP42858 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.7■□□□□ 0.74
HTTP42858 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTTP42858 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTTP42858 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTTP42858 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.7■□□□□ 0.74
HTTP42858 AC009949.1-201ENST00000623048 1830 ntBASIC19.7■□□□□ 0.74
HTTP42858 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.7■□□□□ 0.74
HTTP42858 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HTTP42858 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.69■□□□□ 0.74
HTTP42858 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTTP42858 SPDYE14P-201ENST00000442619 822 ntBASIC19.69■□□□□ 0.74
HTTP42858 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.69■□□□□ 0.74
HTTP42858 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.69■□□□□ 0.74
HTTP42858 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.69■□□□□ 0.74
HTTP42858 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.69■□□□□ 0.74
HTTP42858 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.69■□□□□ 0.74
HTTP42858 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.69■□□□□ 0.74
HTTP42858 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.69■□□□□ 0.74
HTTP42858 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTTP42858 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTTP42858 AC112191.1-201ENST00000523689 701 ntBASIC19.69■□□□□ 0.74
HTTP42858 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.69■□□□□ 0.74
HTTP42858 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTTP42858 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTTP42858 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTTP42858 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTTP42858 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTTP42858 AC126763.1-201ENST00000552015 2118 ntBASIC19.69■□□□□ 0.74
HTTP42858 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTTP42858 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTTP42858 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HTTP42858 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.69■□□□□ 0.74
HTTP42858 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.69■□□□□ 0.74
HTTP42858 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.69■□□□□ 0.74
HTTP42858 MIR6799-201ENST00000620297 69 ntBASIC19.69■□□□□ 0.74
HTTP42858 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTTP42858 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTTP42858 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.69■□□□□ 0.74
HTTP42858 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HTTP42858 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTTP42858 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.68■□□□□ 0.74
HTTP42858 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTTP42858 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.68■□□□□ 0.74
HTTP42858 SPDYE11-202ENST00000450699 704 ntBASIC19.68■□□□□ 0.74
HTTP42858 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.68■□□□□ 0.74
HTTP42858 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.68■□□□□ 0.74
HTTP42858 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.68■□□□□ 0.74
HTTP42858 SPDYE9P-201ENST00000570642 692 ntBASIC19.68■□□□□ 0.74
HTTP42858 SPDYE10P-202ENST00000612005 668 ntBASIC19.68■□□□□ 0.74
HTTP42858 SPDYE8P-202ENST00000612377 668 ntBASIC19.68■□□□□ 0.74
HTTP42858 IGHV3-72-202ENST00000621503 303 ntBASIC19.68■□□□□ 0.74
HTTP42858 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTTP42858 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HTTP42858 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTTP42858 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.68■□□□□ 0.74
HTTP42858 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTTP42858 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTTP42858 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.68■□□□□ 0.74
HTTP42858 CXCL1P1-201ENST00000502804 216 ntBASIC19.68■□□□□ 0.74
HTTP42858 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.68■□□□□ 0.74
HTTP42858 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.68■□□□□ 0.74
HTTP42858 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTTP42858 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HTTP42858 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HTTP42858 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.68■□□□□ 0.74
HTTP42858 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTTP42858 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms