Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 LHX6-205ENST00000464484 666 ntTSL 2 BASIC22.42■■□□□ 1.18
ATP6V1AP38606 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ATP6V1AP38606 TK1-204ENST00000590430 683 ntTSL 3 BASIC22.42■■□□□ 1.18
ATP6V1AP38606 AC105339.1-204ENST00000636249 355 ntBASIC22.42■■□□□ 1.18
ATP6V1AP38606 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP6V1AP38606 AC009949.1-201ENST00000623048 1830 ntBASIC22.42■■□□□ 1.18
ATP6V1AP38606 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP6V1AP38606 PI4KAP1-204ENST00000612579 1703 ntBASIC22.42■■□□□ 1.18
ATP6V1AP38606 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP6V1AP38606 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP6V1AP38606 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.42■■□□□ 1.18
ATP6V1AP38606 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP6V1AP38606 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC22.42■■□□□ 1.18
ATP6V1AP38606 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
ATP6V1AP38606 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V1AP38606 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V1AP38606 AC120498.9-201ENST00000339021 3867 ntBASIC22.41■■□□□ 1.18
ATP6V1AP38606 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V1AP38606 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
ATP6V1AP38606 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
ATP6V1AP38606 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V1AP38606 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.41■■□□□ 1.18
ATP6V1AP38606 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC22.41■■□□□ 1.18
ATP6V1AP38606 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
ATP6V1AP38606 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V1AP38606 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V1AP38606 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC22.41■■□□□ 1.18
ATP6V1AP38606 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
ATP6V1AP38606 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
ATP6V1AP38606 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V1AP38606 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
ATP6V1AP38606 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC22.41■■□□□ 1.18
ATP6V1AP38606 RPL28-205ENST00000558131 444 ntTSL 5 BASIC22.41■■□□□ 1.18
ATP6V1AP38606 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC22.41■■□□□ 1.18
ATP6V1AP38606 AC116407.2-201ENST00000613639 860 ntBASIC22.41■■□□□ 1.18
ATP6V1AP38606 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V1AP38606 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC22.41■■□□□ 1.18
ATP6V1AP38606 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V1AP38606 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V1AP38606 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
ATP6V1AP38606 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V1AP38606 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.4■■□□□ 1.18
ATP6V1AP38606 HARS-201ENST00000307633 1780 ntTSL 2 BASIC22.4■■□□□ 1.18
ATP6V1AP38606 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.4■■□□□ 1.18
ATP6V1AP38606 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V1AP38606 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V1AP38606 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
ATP6V1AP38606 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
ATP6V1AP38606 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V1AP38606 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V1AP38606 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V1AP38606 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V1AP38606 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V1AP38606 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V1AP38606 BCRP1-201ENST00000444246 691 ntBASIC22.4■■□□□ 1.18
ATP6V1AP38606 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC22.4■■□□□ 1.18
ATP6V1AP38606 CXCL1P1-201ENST00000502804 216 ntBASIC22.4■■□□□ 1.18
ATP6V1AP38606 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC22.4■■□□□ 1.18
ATP6V1AP38606 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC22.4■■□□□ 1.18
ATP6V1AP38606 CYB561-216ENST00000582297 897 ntTSL 3 BASIC22.4■■□□□ 1.18
ATP6V1AP38606 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC22.4■■□□□ 1.18
ATP6V1AP38606 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC22.4■■□□□ 1.18
ATP6V1AP38606 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC22.4■■□□□ 1.18
ATP6V1AP38606 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V1AP38606 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.4■■□□□ 1.18
ATP6V1AP38606 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
ATP6V1AP38606 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC22.4■■□□□ 1.18
ATP6V1AP38606 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC22.4■■□□□ 1.18
ATP6V1AP38606 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP6V1AP38606 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
ATP6V1AP38606 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
ATP6V1AP38606 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ATP6V1AP38606 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ATP6V1AP38606 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC22.39■■□□□ 1.18
ATP6V1AP38606 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ATP6V1AP38606 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.39■■□□□ 1.18
ATP6V1AP38606 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ATP6V1AP38606 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
ATP6V1AP38606 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ATP6V1AP38606 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP6V1AP38606 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP6V1AP38606 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP6V1AP38606 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC22.39■■□□□ 1.17
ATP6V1AP38606 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC22.39■■□□□ 1.17
ATP6V1AP38606 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC22.39■■□□□ 1.17
ATP6V1AP38606 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC22.39■■□□□ 1.17
ATP6V1AP38606 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC22.39■■□□□ 1.17
ATP6V1AP38606 AL096865.1-201ENST00000606796 927 ntBASIC22.39■■□□□ 1.17
ATP6V1AP38606 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP6V1AP38606 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC22.39■■□□□ 1.17
ATP6V1AP38606 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
ATP6V1AP38606 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.39■■□□□ 1.17
ATP6V1AP38606 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ATP6V1AP38606 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
ATP6V1AP38606 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC22.38■■□□□ 1.17
ATP6V1AP38606 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP6V1AP38606 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP6V1AP38606 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP6V1AP38606 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP6V1AP38606 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms