Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RPA3P35244 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPA3P35244 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RPA3P35244 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPA3P35244 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RPA3P35244 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.91■□□□□ 0.46
RPA3P35244 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RPA3P35244 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.91■□□□□ 0.46
RPA3P35244 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RPA3P35244 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPA3P35244 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.91■□□□□ 0.46
RPA3P35244 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPA3P35244 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPA3P35244 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPA3P35244 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.91■□□□□ 0.46
RPA3P35244 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RPA3P35244 RN7SL850P-201ENST00000579959 291 ntBASIC17.91■□□□□ 0.46
RPA3P35244 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPA3P35244 AC139887.4-201ENST00000607877 719 ntBASIC17.91■□□□□ 0.46
RPA3P35244 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPA3P35244 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPA3P35244 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPA3P35244 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPA3P35244 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.91■□□□□ 0.46
RPA3P35244 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RPA3P35244 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.91■□□□□ 0.46
RPA3P35244 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.91■□□□□ 0.46
RPA3P35244 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RPA3P35244 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPA3P35244 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.91■□□□□ 0.46
RPA3P35244 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RPA3P35244 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RPA3P35244 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPA3P35244 HLA-J-201ENST00000462773 1622 ntBASIC17.9■□□□□ 0.46
RPA3P35244 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPA3P35244 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.9■□□□□ 0.46
RPA3P35244 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.9■□□□□ 0.46
RPA3P35244 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPA3P35244 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RPA3P35244 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPA3P35244 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RPA3P35244 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
RPA3P35244 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPA3P35244 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPA3P35244 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RPA3P35244 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPA3P35244 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.9■□□□□ 0.46
RPA3P35244 TMPOP1-202ENST00000424642 1267 ntBASIC17.9■□□□□ 0.46
RPA3P35244 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.9■□□□□ 0.46
RPA3P35244 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPA3P35244 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.9■□□□□ 0.46
RPA3P35244 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPA3P35244 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPA3P35244 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPA3P35244 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPA3P35244 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPA3P35244 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPA3P35244 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPA3P35244 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPA3P35244 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RPA3P35244 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
RPA3P35244 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.89■□□□□ 0.46
RPA3P35244 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RPA3P35244 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
RPA3P35244 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.89■□□□□ 0.45
RPA3P35244 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RPA3P35244 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.89■□□□□ 0.45
RPA3P35244 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.89■□□□□ 0.45
RPA3P35244 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.89■□□□□ 0.45
RPA3P35244 AC104390.1-201ENST00000555663 520 ntBASIC17.89■□□□□ 0.45
RPA3P35244 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.89■□□□□ 0.45
RPA3P35244 AC009065.1-201ENST00000564055 1225 ntBASIC17.89■□□□□ 0.45
RPA3P35244 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.89■□□□□ 0.45
RPA3P35244 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.89■□□□□ 0.45
RPA3P35244 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.89■□□□□ 0.45
RPA3P35244 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.89■□□□□ 0.45
RPA3P35244 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.89■□□□□ 0.45
RPA3P35244 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.89■□□□□ 0.45
RPA3P35244 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPA3P35244 AGGF1P2-201ENST00000426656 2106 ntBASIC17.89■□□□□ 0.45
RPA3P35244 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms