Protein–RNA interactions for Protein: P35222

CTNNB1, Catenin beta-1, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1P35222 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNB1P35222 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNB1P35222 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNB1P35222 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNB1P35222 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNB1P35222 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNB1P35222 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CTNNB1P35222 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.67■□□□□ 0.58
CTNNB1P35222 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.67■□□□□ 0.58
CTNNB1P35222 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.67■□□□□ 0.58
CTNNB1P35222 BCRP1-201ENST00000444246 691 ntBASIC18.67■□□□□ 0.58
CTNNB1P35222 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.67■□□□□ 0.58
CTNNB1P35222 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.67■□□□□ 0.58
CTNNB1P35222 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.67■□□□□ 0.58
CTNNB1P35222 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.67■□□□□ 0.58
CTNNB1P35222 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.67■□□□□ 0.58
CTNNB1P35222 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.67■□□□□ 0.58
CTNNB1P35222 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.67■□□□□ 0.58
CTNNB1P35222 AL513210.1-201ENST00000629608 234 ntBASIC18.67■□□□□ 0.58
CTNNB1P35222 AC092902.6-201ENST00000641783 218 ntBASIC18.67■□□□□ 0.58
CTNNB1P35222 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNB1P35222 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNB1P35222 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNB1P35222 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.67■□□□□ 0.58
CTNNB1P35222 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.67■□□□□ 0.58
CTNNB1P35222 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNB1P35222 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CTNNB1P35222 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CTNNB1P35222 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNB1P35222 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.66■□□□□ 0.58
CTNNB1P35222 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CTNNB1P35222 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNB1P35222 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNB1P35222 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.66■□□□□ 0.58
CTNNB1P35222 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.66■□□□□ 0.58
CTNNB1P35222 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.66■□□□□ 0.58
CTNNB1P35222 AL096865.1-201ENST00000606796 927 ntBASIC18.66■□□□□ 0.58
CTNNB1P35222 AC116407.2-201ENST00000613639 860 ntBASIC18.66■□□□□ 0.58
CTNNB1P35222 AC009336.1-201ENST00000608941 1553 ntBASIC18.66■□□□□ 0.58
CTNNB1P35222 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNB1P35222 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CTNNB1P35222 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNB1P35222 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.66■□□□□ 0.58
CTNNB1P35222 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNB1P35222 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CTNNB1P35222 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.66■□□□□ 0.58
CTNNB1P35222 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNB1P35222 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNB1P35222 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNB1P35222 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.66■□□□□ 0.58
CTNNB1P35222 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTNNB1P35222 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.65■□□□□ 0.58
CTNNB1P35222 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.65■□□□□ 0.58
CTNNB1P35222 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CTNNB1P35222 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CTNNB1P35222 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 AC004461.1-201ENST00000412461 403 ntBASIC18.65■□□□□ 0.58
CTNNB1P35222 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.65■□□□□ 0.58
CTNNB1P35222 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.65■□□□□ 0.58
CTNNB1P35222 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.65■□□□□ 0.58
CTNNB1P35222 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 AC068137.2-201ENST00000605408 478 ntBASIC18.65■□□□□ 0.58
CTNNB1P35222 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.65■□□□□ 0.58
CTNNB1P35222 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.65■□□□□ 0.58
CTNNB1P35222 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.65■□□□□ 0.58
CTNNB1P35222 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CTNNB1P35222 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CTNNB1P35222 PI4KAP1-204ENST00000612579 1703 ntBASIC18.65■□□□□ 0.58
CTNNB1P35222 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTNNB1P35222 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.65■□□□□ 0.58
CTNNB1P35222 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.64■□□□□ 0.58
CTNNB1P35222 BX276092.7-203ENST00000637198 1536 ntBASIC18.64■□□□□ 0.58
CTNNB1P35222 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CTNNB1P35222 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.64■□□□□ 0.58
CTNNB1P35222 RNF165-205ENST00000588679 2904 ntBASIC18.64■□□□□ 0.58
CTNNB1P35222 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTNNB1P35222 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNB1P35222 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNB1P35222 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNB1P35222 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNB1P35222 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNB1P35222 AL031598.1-201ENST00000561511 1773 ntBASIC18.64■□□□□ 0.57
CTNNB1P35222 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTNNB1P35222 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms