Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.82■■□□□ 1.08
TM4SF1P30408 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.82■■□□□ 1.08
TM4SF1P30408 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.82■■□□□ 1.08
TM4SF1P30408 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.82■■□□□ 1.08
TM4SF1P30408 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.82■■□□□ 1.08
TM4SF1P30408 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.82■■□□□ 1.08
TM4SF1P30408 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.82■■□□□ 1.08
TM4SF1P30408 AC002558.1-201ENST00000488906 803 ntBASIC21.82■■□□□ 1.08
TM4SF1P30408 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.82■■□□□ 1.08
TM4SF1P30408 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.82■■□□□ 1.08
TM4SF1P30408 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.82■■□□□ 1.08
TM4SF1P30408 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.82■■□□□ 1.08
TM4SF1P30408 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.82■■□□□ 1.08
TM4SF1P30408 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 AC009093.7-201ENST00000623853 1223 ntBASIC21.82■■□□□ 1.08
TM4SF1P30408 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.82■■□□□ 1.08
TM4SF1P30408 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TM4SF1P30408 AC093677.2-201ENST00000600169 1863 ntBASIC21.81■■□□□ 1.08
TM4SF1P30408 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
TM4SF1P30408 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
TM4SF1P30408 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.81■■□□□ 1.08
TM4SF1P30408 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.81■■□□□ 1.08
TM4SF1P30408 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 AL627223.1-201ENST00000416693 442 ntBASIC21.81■■□□□ 1.08
TM4SF1P30408 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.81■■□□□ 1.08
TM4SF1P30408 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TM4SF1P30408 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.81■■□□□ 1.08
TM4SF1P30408 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.81■■□□□ 1.08
TM4SF1P30408 AC116407.2-201ENST00000613639 860 ntBASIC21.81■■□□□ 1.08
TM4SF1P30408 AJ011932.1-201ENST00000621707 465 ntBASIC21.81■■□□□ 1.08
TM4SF1P30408 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.81■■□□□ 1.08
TM4SF1P30408 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.81■■□□□ 1.08
TM4SF1P30408 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM4SF1P30408 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.8■■□□□ 1.08
TM4SF1P30408 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.8■■□□□ 1.08
TM4SF1P30408 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.8■■□□□ 1.08
TM4SF1P30408 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TM4SF1P30408 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM4SF1P30408 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TM4SF1P30408 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.8■■□□□ 1.08
TM4SF1P30408 FAM86GP-201ENST00000448322 971 ntBASIC21.8■■□□□ 1.08
TM4SF1P30408 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.8■■□□□ 1.08
TM4SF1P30408 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.8■■□□□ 1.08
TM4SF1P30408 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.8■■□□□ 1.08
TM4SF1P30408 AC112191.1-201ENST00000523689 701 ntBASIC21.8■■□□□ 1.08
TM4SF1P30408 AC069262.1-201ENST00000539058 672 ntBASIC21.8■■□□□ 1.08
TM4SF1P30408 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM4SF1P30408 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TM4SF1P30408 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.8■■□□□ 1.08
TM4SF1P30408 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF1P30408 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF1P30408 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.79■■□□□ 1.08
TM4SF1P30408 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF1P30408 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF1P30408 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
TM4SF1P30408 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF1P30408 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.79■■□□□ 1.08
TM4SF1P30408 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.79■■□□□ 1.08
TM4SF1P30408 AL513480.1-201ENST00000451731 511 ntBASIC21.79■■□□□ 1.08
TM4SF1P30408 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF1P30408 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF1P30408 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.79■■□□□ 1.08
TM4SF1P30408 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.79■■□□□ 1.08
TM4SF1P30408 AC026120.1-201ENST00000611536 926 ntBASIC21.79■■□□□ 1.08
TM4SF1P30408 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF1P30408 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.79■■□□□ 1.08
TM4SF1P30408 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM4SF1P30408 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TM4SF1P30408 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.78■■□□□ 1.08
TM4SF1P30408 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms