Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.82■□□□□ 0.28
MMP11P24347 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.82■□□□□ 0.28
MMP11P24347 AF238378.1-201ENST00000526806 358 ntBASIC16.82■□□□□ 0.28
MMP11P24347 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
MMP11P24347 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.82■□□□□ 0.28
MMP11P24347 AL138831.2-201ENST00000606564 490 ntBASIC16.82■□□□□ 0.28
MMP11P24347 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
MMP11P24347 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MMP11P24347 AL096828.2-201ENST00000567259 1965 ntBASIC16.82■□□□□ 0.28
MMP11P24347 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MMP11P24347 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MMP11P24347 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.81■□□□□ 0.28
MMP11P24347 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.81■□□□□ 0.28
MMP11P24347 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP11P24347 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.81■□□□□ 0.28
MMP11P24347 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.81■□□□□ 0.28
MMP11P24347 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MMP11P24347 RCN1P2-201ENST00000398357 915 ntBASIC16.81■□□□□ 0.28
MMP11P24347 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.81■□□□□ 0.28
MMP11P24347 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.81■□□□□ 0.28
MMP11P24347 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.81■□□□□ 0.28
MMP11P24347 SLC25A6P4-201ENST00000586535 553 ntBASIC16.81■□□□□ 0.28
MMP11P24347 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.81■□□□□ 0.28
MMP11P24347 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP11P24347 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP11P24347 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP11P24347 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.81■□□□□ 0.28
MMP11P24347 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MMP11P24347 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MMP11P24347 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MMP11P24347 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MMP11P24347 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP11P24347 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP11P24347 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP11P24347 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 AC125634.1-201ENST00000438758 1403 ntBASIC16.8■□□□□ 0.28
MMP11P24347 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
MMP11P24347 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.8■□□□□ 0.28
MMP11P24347 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 AC132008.2-207ENST00000454517 770 ntBASIC16.8■□□□□ 0.28
MMP11P24347 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.8■□□□□ 0.28
MMP11P24347 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.8■□□□□ 0.28
MMP11P24347 AC064862.7-201ENST00000604520 867 ntBASIC16.8■□□□□ 0.28
MMP11P24347 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.8■□□□□ 0.28
MMP11P24347 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
MMP11P24347 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MMP11P24347 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP11P24347 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MMP11P24347 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
MMP11P24347 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP11P24347 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
MMP11P24347 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
MMP11P24347 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP11P24347 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP11P24347 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP11P24347 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP11P24347 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP11P24347 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.79■□□□□ 0.28
MMP11P24347 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms