Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 AK4P3-201ENST00000418260 669 ntBASIC15.23■□□□□ 0.03
CCL1P22362 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.23■□□□□ 0.03
CCL1P22362 SPDYE13P-201ENST00000445314 798 ntBASIC15.23■□□□□ 0.03
CCL1P22362 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL1P22362 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.23■□□□□ 0.03
CCL1P22362 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CCL1P22362 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL1P22362 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCL1P22362 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL1P22362 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL1P22362 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCL1P22362 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 AC010460.3-201ENST00000511359 1579 ntBASIC15.23■□□□□ 0.03
CCL1P22362 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CCL1P22362 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL1P22362 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL1P22362 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL1P22362 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL1P22362 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL1P22362 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 Z83836.1-201ENST00000624605 1642 ntBASIC15.22■□□□□ 0.03
CCL1P22362 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CCL1P22362 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 KRT18P57-201ENST00000443599 1254 ntBASIC15.22■□□□□ 0.03
CCL1P22362 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.22■□□□□ 0.03
CCL1P22362 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL1P22362 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.22■□□□□ 0.03
CCL1P22362 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL1P22362 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.22■□□□□ 0.03
CCL1P22362 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CCL1P22362 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL1P22362 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL1P22362 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL1P22362 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL1P22362 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL1P22362 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL1P22362 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL1P22362 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL1P22362 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCL1P22362 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL1P22362 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL1P22362 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL1P22362 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL1P22362 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCL1P22362 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL1P22362 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.21■□□□□ 0.03
CCL1P22362 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL1P22362 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL1P22362 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.21■□□□□ 0.03
CCL1P22362 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CCL1P22362 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL1P22362 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL1P22362 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL1P22362 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.21■□□□□ 0.03
CCL1P22362 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL1P22362 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.21■□□□□ 0.03
CCL1P22362 HTR7P1-202ENST00000624664 4411 ntBASIC15.21■□□□□ 0.03
CCL1P22362 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.21■□□□□ 0.02
CCL1P22362 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCL1P22362 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CCL1P22362 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.02
CCL1P22362 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CCL1P22362 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCL1P22362 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCL1P22362 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.2■□□□□ 0.02
CCL1P22362 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCL1P22362 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CCL1P22362 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL1P22362 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCL1P22362 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL1P22362 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCL1P22362 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCL1P22362 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.2■□□□□ 0.02
CCL1P22362 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms