Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM21P19474 CROCCP1-201ENST00000426910 5675 ntBASIC19.56■□□□□ 0.72
TRIM21P19474 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM21P19474 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM21P19474 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM21P19474 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM21P19474 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM21P19474 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM21P19474 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM21P19474 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM21P19474 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM21P19474 AC022898.2-201ENST00000616822 1312 ntBASIC19.55■□□□□ 0.72
TRIM21P19474 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM21P19474 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRIM21P19474 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
TRIM21P19474 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM21P19474 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM21P19474 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM21P19474 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.55■□□□□ 0.72
TRIM21P19474 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
TRIM21P19474 AL121956.5-201ENST00000625261 221 ntBASIC19.55■□□□□ 0.72
TRIM21P19474 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM21P19474 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM21P19474 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM21P19474 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM21P19474 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM21P19474 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM21P19474 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM21P19474 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM21P19474 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM21P19474 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRIM21P19474 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM21P19474 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRIM21P19474 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRIM21P19474 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM21P19474 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM21P19474 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
TRIM21P19474 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM21P19474 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRIM21P19474 AC009053.2-201ENST00000563701 2365 ntBASIC19.54■□□□□ 0.72
TRIM21P19474 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM21P19474 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM21P19474 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM21P19474 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM21P19474 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM21P19474 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM21P19474 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM21P19474 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM21P19474 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.54■□□□□ 0.72
TRIM21P19474 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM21P19474 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM21P19474 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
TRIM21P19474 ZNF444P1-201ENST00000559497 298 ntBASIC19.54■□□□□ 0.72
TRIM21P19474 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM21P19474 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM21P19474 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TRIM21P19474 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM21P19474 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM21P19474 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM21P19474 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM21P19474 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM21P19474 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM21P19474 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
TRIM21P19474 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM21P19474 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM21P19474 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM21P19474 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM21P19474 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM21P19474 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM21P19474 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM21P19474 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM21P19474 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM21P19474 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM21P19474 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM21P19474 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM21P19474 AC133963.1-201ENST00000504166 1679 ntBASIC19.53■□□□□ 0.72
TRIM21P19474 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM21P19474 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM21P19474 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TRIM21P19474 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM21P19474 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM21P19474 AL391807.1-203ENST00000604392 2365 ntBASIC19.53■□□□□ 0.72
TRIM21P19474 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM21P19474 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM21P19474 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM21P19474 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRIM21P19474 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM21P19474 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM21P19474 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM21P19474 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM21P19474 PCDHA12-202ENST00000613593 2588 ntBASIC19.53■□□□□ 0.72
TRIM21P19474 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
TRIM21P19474 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM21P19474 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM21P19474 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM21P19474 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRIM21P19474 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM21P19474 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM21P19474 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM21P19474 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms