Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
CD58P19256 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.01■□□□□ 0.63
CD58P19256 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.01■□□□□ 0.63
CD58P19256 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.01■□□□□ 0.63
CD58P19256 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CD58P19256 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.01■□□□□ 0.63
CD58P19256 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.01■□□□□ 0.63
CD58P19256 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CD58P19256 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.01■□□□□ 0.63
CD58P19256 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CD58P19256 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.01■□□□□ 0.63
CD58P19256 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 GNAS-203ENST00000306120 1878 ntBASIC19.01■□□□□ 0.63
CD58P19256 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD58P19256 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CD58P19256 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19■□□□□ 0.63
CD58P19256 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CD58P19256 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19■□□□□ 0.63
CD58P19256 FST-202ENST00000396947 2538 ntTSL 5 BASIC19■□□□□ 0.63
CD58P19256 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CD58P19256 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD58P19256 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CD58P19256 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CD58P19256 IGHV3-47-201ENST00000425060 335 ntBASIC19■□□□□ 0.63
CD58P19256 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19■□□□□ 0.63
CD58P19256 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD58P19256 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD58P19256 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD58P19256 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CD58P19256 AC012615.1-201ENST00000565797 1299 ntBASIC19■□□□□ 0.63
CD58P19256 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19■□□□□ 0.63
CD58P19256 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19■□□□□ 0.63
CD58P19256 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CD58P19256 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19■□□□□ 0.63
CD58P19256 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CD58P19256 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CD58P19256 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19■□□□□ 0.63
CD58P19256 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD58P19256 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD58P19256 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19■□□□□ 0.63
CD58P19256 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19■□□□□ 0.63
CD58P19256 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD58P19256 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CD58P19256 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD58P19256 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CD58P19256 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD58P19256 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19■□□□□ 0.63
CD58P19256 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD58P19256 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19■□□□□ 0.63
CD58P19256 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19■□□□□ 0.63
CD58P19256 PKD1P1-201ENST00000458669 6805 ntBASIC19■□□□□ 0.63
CD58P19256 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19■□□□□ 0.63
CD58P19256 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CD58P19256 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CD58P19256 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD58P19256 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.99■□□□□ 0.63
CD58P19256 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.99■□□□□ 0.63
CD58P19256 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
CD58P19256 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD58P19256 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD58P19256 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.99■□□□□ 0.63
CD58P19256 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD58P19256 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD58P19256 AC007967.3-201ENST00000434308 558 ntBASIC18.99■□□□□ 0.63
CD58P19256 AC096582.2-201ENST00000510860 516 ntBASIC18.99■□□□□ 0.63
CD58P19256 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD58P19256 AC099336.1-202ENST00000602961 463 ntBASIC18.99■□□□□ 0.63
CD58P19256 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD58P19256 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.99■□□□□ 0.63
CD58P19256 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.99■□□□□ 0.63
CD58P19256 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.99■□□□□ 0.63
CD58P19256 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD58P19256 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.99■□□□□ 0.63
CD58P19256 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CD58P19256 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD58P19256 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD58P19256 AL355312.1-201ENST00000407115 2176 ntBASIC18.99■□□□□ 0.63
CD58P19256 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD58P19256 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD58P19256 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD58P19256 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.99■□□□□ 0.63
CD58P19256 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.99■□□□□ 0.63
CD58P19256 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CD58P19256 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms