Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
CSF1RP07333 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CSF1RP07333 GPR89P-201ENST00000407924 1495 ntBASIC21.68■■□□□ 1.06
CSF1RP07333 AC006116.8-202ENST00000587620 1550 ntBASIC21.68■■□□□ 1.06
CSF1RP07333 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSF1RP07333 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSF1RP07333 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
CSF1RP07333 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.68■■□□□ 1.06
CSF1RP07333 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.68■■□□□ 1.06
CSF1RP07333 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CSF1RP07333 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.68■■□□□ 1.06
CSF1RP07333 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSF1RP07333 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSF1RP07333 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSF1RP07333 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSF1RP07333 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CSF1RP07333 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.67■■□□□ 1.06
CSF1RP07333 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSF1RP07333 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.67■■□□□ 1.06
CSF1RP07333 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CSF1RP07333 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
CSF1RP07333 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSF1RP07333 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSF1RP07333 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSF1RP07333 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSF1RP07333 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSF1RP07333 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSF1RP07333 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.67■■□□□ 1.06
CSF1RP07333 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CSF1RP07333 AC007967.2-201ENST00000432613 625 ntBASIC21.67■■□□□ 1.06
CSF1RP07333 KRT18P2-201ENST00000447938 1258 ntBASIC21.67■■□□□ 1.06
CSF1RP07333 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.67■■□□□ 1.06
CSF1RP07333 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.67■■□□□ 1.06
CSF1RP07333 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.67■■□□□ 1.06
CSF1RP07333 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.67■■□□□ 1.06
CSF1RP07333 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.67■■□□□ 1.06
CSF1RP07333 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSF1RP07333 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CSF1RP07333 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSF1RP07333 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSF1RP07333 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CSF1RP07333 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSF1RP07333 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.66■■□□□ 1.06
CSF1RP07333 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.66■■□□□ 1.06
CSF1RP07333 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.66■■□□□ 1.06
CSF1RP07333 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSF1RP07333 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSF1RP07333 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSF1RP07333 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSF1RP07333 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSF1RP07333 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.66■■□□□ 1.06
CSF1RP07333 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.66■■□□□ 1.06
CSF1RP07333 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSF1RP07333 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSF1RP07333 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.66■■□□□ 1.06
CSF1RP07333 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.66■■□□□ 1.06
CSF1RP07333 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.66■■□□□ 1.06
CSF1RP07333 BX842568.4-201ENST00000421222 227 ntBASIC21.66■■□□□ 1.06
CSF1RP07333 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.66■■□□□ 1.06
CSF1RP07333 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.66■■□□□ 1.06
CSF1RP07333 SLC25A6P5-201ENST00000435663 894 ntBASIC21.66■■□□□ 1.06
CSF1RP07333 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSF1RP07333 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.66■■□□□ 1.06
CSF1RP07333 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.66■■□□□ 1.06
CSF1RP07333 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.66■■□□□ 1.06
CSF1RP07333 LINC01451-201ENST00000623792 534 ntBASIC21.66■■□□□ 1.06
CSF1RP07333 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSF1RP07333 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSF1RP07333 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSF1RP07333 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.66■■□□□ 1.06
CSF1RP07333 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSF1RP07333 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSF1RP07333 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
CSF1RP07333 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.66■■□□□ 1.06
CSF1RP07333 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.66■■□□□ 1.06
CSF1RP07333 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSF1RP07333 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSF1RP07333 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSF1RP07333 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSF1RP07333 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSF1RP07333 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSF1RP07333 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSF1RP07333 PTCHD3P3-201ENST00000403073 906 ntBASIC21.65■■□□□ 1.06
CSF1RP07333 AC108073.2-201ENST00000464002 357 ntBASIC21.65■■□□□ 1.06
CSF1RP07333 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.65■■□□□ 1.06
CSF1RP07333 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.65■■□□□ 1.06
CSF1RP07333 AC092865.5-201ENST00000545435 363 ntBASIC21.65■■□□□ 1.06
CSF1RP07333 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.65■■□□□ 1.06
CSF1RP07333 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.65■■□□□ 1.06
CSF1RP07333 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSF1RP07333 AL805961.1-202ENST00000641562 540 ntBASIC21.65■■□□□ 1.06
CSF1RP07333 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSF1RP07333 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.65■■□□□ 1.06
CSF1RP07333 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSF1RP07333 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
CSF1RP07333 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSF1RP07333 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CSF1RP07333 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CSF1RP07333 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.65■■□□□ 1.06
CSF1RP07333 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms