Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM3P06753 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.88■□□□□ 0.77
TPM3P06753 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TPM3P06753 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TPM3P06753 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TPM3P06753 FAM197Y1-201ENST00000421178 764 ntBASIC19.88■□□□□ 0.77
TPM3P06753 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.88■□□□□ 0.77
TPM3P06753 AC097488.1-201ENST00000507834 756 ntBASIC19.88■□□□□ 0.77
TPM3P06753 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.88■□□□□ 0.77
TPM3P06753 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TPM3P06753 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.88■□□□□ 0.77
TPM3P06753 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.88■□□□□ 0.77
TPM3P06753 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPM3P06753 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPM3P06753 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPM3P06753 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM3P06753 LINC00304-203ENST00000565008 1864 ntBASIC19.88■□□□□ 0.77
TPM3P06753 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TPM3P06753 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.88■□□□□ 0.77
TPM3P06753 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TPM3P06753 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM3P06753 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM3P06753 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TPM3P06753 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.87■□□□□ 0.77
TPM3P06753 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.87■□□□□ 0.77
TPM3P06753 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM3P06753 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM3P06753 AC022898.2-201ENST00000616822 1312 ntBASIC19.87■□□□□ 0.77
TPM3P06753 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM3P06753 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TPM3P06753 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TPM3P06753 AC128676.1-201ENST00000454392 318 ntBASIC19.87■□□□□ 0.77
TPM3P06753 RPPH1-201ENST00000516869 333 ntBASIC19.87■□□□□ 0.77
TPM3P06753 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM3P06753 CD177P1-201ENST00000606252 935 ntBASIC19.87■□□□□ 0.77
TPM3P06753 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TPM3P06753 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TPM3P06753 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM3P06753 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM3P06753 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM3P06753 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TPM3P06753 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TPM3P06753 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TPM3P06753 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TPM3P06753 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TPM3P06753 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.86■□□□□ 0.77
TPM3P06753 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM3P06753 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM3P06753 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TPM3P06753 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM3P06753 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM3P06753 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TPM3P06753 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.86■□□□□ 0.77
TPM3P06753 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM3P06753 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.86■□□□□ 0.77
TPM3P06753 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM3P06753 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM3P06753 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TPM3P06753 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM3P06753 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.86■□□□□ 0.77
TPM3P06753 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.86■□□□□ 0.77
TPM3P06753 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.86■□□□□ 0.77
TPM3P06753 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
TPM3P06753 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.86■□□□□ 0.77
TPM3P06753 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.86■□□□□ 0.77
TPM3P06753 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.86■□□□□ 0.77
TPM3P06753 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.86■□□□□ 0.77
TPM3P06753 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.86■□□□□ 0.77
TPM3P06753 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.86■□□□□ 0.77
TPM3P06753 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM3P06753 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.86■□□□□ 0.77
TPM3P06753 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.86■□□□□ 0.77
TPM3P06753 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
TPM3P06753 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TPM3P06753 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM3P06753 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
TPM3P06753 AL024508.2-201ENST00000607749 1894 ntBASIC19.86■□□□□ 0.77
TPM3P06753 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TPM3P06753 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TPM3P06753 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM3P06753 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.85■□□□□ 0.77
TPM3P06753 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM3P06753 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM3P06753 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM3P06753 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM3P06753 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM3P06753 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TPM3P06753 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.85■□□□□ 0.77
TPM3P06753 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM3P06753 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TPM3P06753 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.85■□□□□ 0.77
TPM3P06753 AC116562.2-201ENST00000507042 360 ntBASIC19.85■□□□□ 0.77
TPM3P06753 MIR4674-201ENST00000582457 87 ntBASIC19.85■□□□□ 0.77
TPM3P06753 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM3P06753 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM3P06753 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
TPM3P06753 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.85■□□□□ 0.77
TPM3P06753 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TPM3P06753 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.85■□□□□ 0.77
TPM3P06753 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms