Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA1P02708 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHRNA1P02708 PTCHD3P3-201ENST00000403073 906 ntBASIC19.17■□□□□ 0.66
CHRNA1P02708 YBX1P5-201ENST00000509441 847 ntBASIC19.17■□□□□ 0.66
CHRNA1P02708 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHRNA1P02708 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.17■□□□□ 0.66
CHRNA1P02708 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
CHRNA1P02708 AL805961.1-202ENST00000641562 540 ntBASIC19.17■□□□□ 0.66
CHRNA1P02708 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA1P02708 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA1P02708 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA1P02708 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA1P02708 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA1P02708 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA1P02708 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRNA1P02708 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA1P02708 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA1P02708 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA1P02708 BX323043.1-201ENST00000641006 1765 ntBASIC19.16■□□□□ 0.66
CHRNA1P02708 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA1P02708 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CHRNA1P02708 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.16■□□□□ 0.66
CHRNA1P02708 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.16■□□□□ 0.66
CHRNA1P02708 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA1P02708 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRNA1P02708 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA1P02708 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRNA1P02708 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA1P02708 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA1P02708 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA1P02708 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CHRNA1P02708 IGLL3P-201ENST00000412472 434 ntBASIC19.16■□□□□ 0.66
CHRNA1P02708 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.16■□□□□ 0.66
CHRNA1P02708 AP006288.1-201ENST00000446065 395 ntBASIC19.16■□□□□ 0.66
CHRNA1P02708 ALG1L5P-201ENST00000482043 771 ntBASIC19.16■□□□□ 0.66
CHRNA1P02708 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.16■□□□□ 0.66
CHRNA1P02708 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.16■□□□□ 0.66
CHRNA1P02708 AL353135.1-201ENST00000606729 504 ntBASIC19.16■□□□□ 0.66
CHRNA1P02708 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA1P02708 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA1P02708 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA1P02708 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA1P02708 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CHRNA1P02708 GPR89P-201ENST00000407924 1495 ntBASIC19.16■□□□□ 0.66
CHRNA1P02708 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA1P02708 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA1P02708 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA1P02708 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRNA1P02708 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA1P02708 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CHRNA1P02708 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.15■□□□□ 0.66
CHRNA1P02708 LINC00982-205ENST00000420957 435 ntBASIC19.15■□□□□ 0.66
CHRNA1P02708 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CHRNA1P02708 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA1P02708 AC027796.2-201ENST00000575326 344 ntBASIC19.15■□□□□ 0.66
CHRNA1P02708 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.15■□□□□ 0.66
CHRNA1P02708 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CHRNA1P02708 AL138781.2-201ENST00000617896 1843 ntBASIC19.15■□□□□ 0.66
CHRNA1P02708 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA1P02708 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA1P02708 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.15■□□□□ 0.66
CHRNA1P02708 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA1P02708 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA1P02708 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA1P02708 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA1P02708 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA1P02708 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRNA1P02708 TNXA-203ENST00000507684 2038 ntBASIC19.15■□□□□ 0.66
CHRNA1P02708 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA1P02708 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.14■□□□□ 0.66
CHRNA1P02708 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.14■□□□□ 0.66
CHRNA1P02708 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.14■□□□□ 0.66
CHRNA1P02708 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CHRNA1P02708 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA1P02708 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA1P02708 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CHRNA1P02708 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.14■□□□□ 0.65
CHRNA1P02708 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.14■□□□□ 0.65
CHRNA1P02708 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA1P02708 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA1P02708 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.14■□□□□ 0.65
CHRNA1P02708 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA1P02708 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA1P02708 AC002558.1-201ENST00000488906 803 ntBASIC19.14■□□□□ 0.65
CHRNA1P02708 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.14■□□□□ 0.65
CHRNA1P02708 OR7E47P-204ENST00000575924 449 ntBASIC19.14■□□□□ 0.65
CHRNA1P02708 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
CHRNA1P02708 MIR4469-201ENST00000583919 79 ntBASIC19.14■□□□□ 0.65
CHRNA1P02708 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.14■□□□□ 0.65
CHRNA1P02708 AL596442.2-201ENST00000610240 980 ntBASIC19.14■□□□□ 0.65
CHRNA1P02708 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA1P02708 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.14■□□□□ 0.65
CHRNA1P02708 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA1P02708 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CHRNA1P02708 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA1P02708 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.13■□□□□ 0.65
CHRNA1P02708 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNA1P02708 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CHRNA1P02708 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNA1P02708 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms