Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.56■□□□□ 0.56
APOEP02649 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOEP02649 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOEP02649 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOEP02649 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOEP02649 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOEP02649 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
APOEP02649 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOEP02649 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
APOEP02649 IGHV3-47-201ENST00000425060 335 ntBASIC18.56■□□□□ 0.56
APOEP02649 NUS1P1-201ENST00000446295 882 ntBASIC18.56■□□□□ 0.56
APOEP02649 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOEP02649 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.56■□□□□ 0.56
APOEP02649 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOEP02649 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
APOEP02649 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
APOEP02649 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
APOEP02649 LINC00896-202ENST00000609602 2128 ntBASIC18.56■□□□□ 0.56
APOEP02649 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOEP02649 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOEP02649 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOEP02649 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOEP02649 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
APOEP02649 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
APOEP02649 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
APOEP02649 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.55■□□□□ 0.56
APOEP02649 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
APOEP02649 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.55■□□□□ 0.56
APOEP02649 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
APOEP02649 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.55■□□□□ 0.56
APOEP02649 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.55■□□□□ 0.56
APOEP02649 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.55■□□□□ 0.56
APOEP02649 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.55■□□□□ 0.56
APOEP02649 AC005336.2-201ENST00000593183 939 ntBASIC18.55■□□□□ 0.56
APOEP02649 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.55■□□□□ 0.56
APOEP02649 AC116407.2-201ENST00000613639 860 ntBASIC18.55■□□□□ 0.56
APOEP02649 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.55■□□□□ 0.56
APOEP02649 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.55■□□□□ 0.56
APOEP02649 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.55■□□□□ 0.56
APOEP02649 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOEP02649 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.54■□□□□ 0.56
APOEP02649 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.54■□□□□ 0.56
APOEP02649 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
APOEP02649 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
APOEP02649 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
APOEP02649 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.54■□□□□ 0.56
APOEP02649 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.54■□□□□ 0.56
APOEP02649 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
APOEP02649 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.54■□□□□ 0.56
APOEP02649 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.54■□□□□ 0.56
APOEP02649 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.54■□□□□ 0.56
APOEP02649 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.54■□□□□ 0.56
APOEP02649 AC138894.3-201ENST00000603787 634 ntBASIC18.54■□□□□ 0.56
APOEP02649 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 AC012313.10-201ENST00000623509 926 ntBASIC18.54■□□□□ 0.56
APOEP02649 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
APOEP02649 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.54■□□□□ 0.56
APOEP02649 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms