Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DRAP01903 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DRAP01903 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DRAP01903 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DRAP01903 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DRAP01903 AC005104.2-201ENST00000427818 678 ntBASIC19.03■□□□□ 0.64
HLA-DRAP01903 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DRAP01903 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.03■□□□□ 0.64
HLA-DRAP01903 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DRAP01903 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DRAP01903 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DRAP01903 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DRAP01903 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DRAP01903 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HLA-DRAP01903 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DRAP01903 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DRAP01903 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DRAP01903 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DRAP01903 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.02■□□□□ 0.64
HLA-DRAP01903 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DRAP01903 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DRAP01903 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HLA-DRAP01903 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DRAP01903 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.02■□□□□ 0.64
HLA-DRAP01903 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DRAP01903 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.02■□□□□ 0.64
HLA-DRAP01903 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
HLA-DRAP01903 MIR3652-201ENST00000579335 131 ntBASIC19.02■□□□□ 0.64
HLA-DRAP01903 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DRAP01903 AC138894.3-201ENST00000603787 634 ntBASIC19.02■□□□□ 0.64
HLA-DRAP01903 AC019129.2-201ENST00000609837 1235 ntBASIC19.02■□□□□ 0.64
HLA-DRAP01903 AC114341.1-201ENST00000618070 349 ntBASIC19.02■□□□□ 0.64
HLA-DRAP01903 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.02■□□□□ 0.64
HLA-DRAP01903 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DRAP01903 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.02■□□□□ 0.64
HLA-DRAP01903 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.02■□□□□ 0.64
HLA-DRAP01903 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DRAP01903 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DRAP01903 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DRAP01903 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DRAP01903 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DRAP01903 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DRAP01903 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
HLA-DRAP01903 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.02■□□□□ 0.63
HLA-DRAP01903 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.02■□□□□ 0.63
HLA-DRAP01903 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DRAP01903 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DRAP01903 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRAP01903 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HLA-DRAP01903 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRAP01903 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DRAP01903 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRAP01903 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRAP01903 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.01■□□□□ 0.63
HLA-DRAP01903 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DRAP01903 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HLA-DRAP01903 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRAP01903 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRAP01903 NUS1P2-201ENST00000417358 873 ntBASIC19.01■□□□□ 0.63
HLA-DRAP01903 POM121L3P-201ENST00000419331 1163 ntBASIC19.01■□□□□ 0.63
HLA-DRAP01903 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.01■□□□□ 0.63
HLA-DRAP01903 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRAP01903 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRAP01903 INTS4P1-201ENST00000438455 1935 ntBASIC19.01■□□□□ 0.63
HLA-DRAP01903 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRAP01903 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.01■□□□□ 0.63
HLA-DRAP01903 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DRAP01903 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRAP01903 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRAP01903 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRAP01903 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
HLA-DRAP01903 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HLA-DRAP01903 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRAP01903 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DRAP01903 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRAP01903 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRAP01903 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRAP01903 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRAP01903 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRAP01903 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRAP01903 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRAP01903 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRAP01903 FOSL1P1-201ENST00000511041 816 ntBASIC19■□□□□ 0.63
HLA-DRAP01903 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19■□□□□ 0.63
HLA-DRAP01903 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19■□□□□ 0.63
HLA-DRAP01903 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DRAP01903 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRAP01903 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRAP01903 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
HLA-DRAP01903 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRAP01903 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRAP01903 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRAP01903 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRAP01903 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRAP01903 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DRAP01903 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DRAP01903 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19■□□□□ 0.63
HLA-DRAP01903 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DRAP01903 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DRAP01903 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms