Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19■□□□□ 0.63
TIMP1P01033 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TIMP1P01033 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TIMP1P01033 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19■□□□□ 0.63
TIMP1P01033 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19■□□□□ 0.63
TIMP1P01033 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TIMP1P01033 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TIMP1P01033 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TIMP1P01033 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TIMP1P01033 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19■□□□□ 0.63
TIMP1P01033 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19■□□□□ 0.63
TIMP1P01033 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19■□□□□ 0.63
TIMP1P01033 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19■□□□□ 0.63
TIMP1P01033 AC126763.1-201ENST00000552015 2118 ntBASIC19■□□□□ 0.63
TIMP1P01033 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TIMP1P01033 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP1P01033 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.99■□□□□ 0.63
TIMP1P01033 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TIMP1P01033 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.99■□□□□ 0.63
TIMP1P01033 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP1P01033 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP1P01033 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.99■□□□□ 0.63
TIMP1P01033 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP1P01033 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP1P01033 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP1P01033 GK-202ENST00000378941 458 ntTSL 3 BASIC18.99■□□□□ 0.63
TIMP1P01033 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.99■□□□□ 0.63
TIMP1P01033 AL355306.1-201ENST00000415580 579 ntBASIC18.99■□□□□ 0.63
TIMP1P01033 ACTG1P4-201ENST00000425123 1122 ntBASIC18.99■□□□□ 0.63
TIMP1P01033 AC002472.2-201ENST00000442739 958 ntBASIC18.99■□□□□ 0.63
TIMP1P01033 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TIMP1P01033 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.99■□□□□ 0.63
TIMP1P01033 SPDYE11-202ENST00000450699 704 ntBASIC18.99■□□□□ 0.63
TIMP1P01033 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.99■□□□□ 0.63
TIMP1P01033 AC069335.1-201ENST00000489972 472 ntBASIC18.99■□□□□ 0.63
TIMP1P01033 KRT8P48-201ENST00000515599 1220 ntBASIC18.99■□□□□ 0.63
TIMP1P01033 AC005225.4-201ENST00000557330 545 ntBASIC18.99■□□□□ 0.63
TIMP1P01033 SPDYE9P-201ENST00000570642 692 ntBASIC18.99■□□□□ 0.63
TIMP1P01033 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.99■□□□□ 0.63
TIMP1P01033 SPDYE10P-202ENST00000612005 668 ntBASIC18.99■□□□□ 0.63
TIMP1P01033 SPDYE8P-202ENST00000612377 668 ntBASIC18.99■□□□□ 0.63
TIMP1P01033 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TIMP1P01033 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP1P01033 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TIMP1P01033 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.99■□□□□ 0.63
TIMP1P01033 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP1P01033 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP1P01033 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP1P01033 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.99■□□□□ 0.63
TIMP1P01033 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIMP1P01033 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TIMP1P01033 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIMP1P01033 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIMP1P01033 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.98■□□□□ 0.63
TIMP1P01033 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
TIMP1P01033 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIMP1P01033 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TIMP1P01033 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
TIMP1P01033 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.98■□□□□ 0.63
TIMP1P01033 TSPY16P-201ENST00000449843 468 ntBASIC18.98■□□□□ 0.63
TIMP1P01033 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.98■□□□□ 0.63
TIMP1P01033 AL512356.2-201ENST00000546955 174 ntBASIC18.98■□□□□ 0.63
TIMP1P01033 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.98■□□□□ 0.63
TIMP1P01033 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.98■□□□□ 0.63
TIMP1P01033 RN7SL204P-201ENST00000582831 262 ntBASIC18.98■□□□□ 0.63
TIMP1P01033 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.98■□□□□ 0.63
TIMP1P01033 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIMP1P01033 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIMP1P01033 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIMP1P01033 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
TIMP1P01033 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.98■□□□□ 0.63
TIMP1P01033 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.98■□□□□ 0.63
TIMP1P01033 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIMP1P01033 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.98■□□□□ 0.63
TIMP1P01033 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.98■□□□□ 0.63
TIMP1P01033 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIMP1P01033 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
TIMP1P01033 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TIMP1P01033 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
TIMP1P01033 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIMP1P01033 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TIMP1P01033 AC100803.2-201ENST00000562459 1963 ntBASIC18.97■□□□□ 0.63
TIMP1P01033 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.97■□□□□ 0.63
TIMP1P01033 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIMP1P01033 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.97■□□□□ 0.63
TIMP1P01033 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIMP1P01033 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.97■□□□□ 0.63
TIMP1P01033 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.97■□□□□ 0.63
TIMP1P01033 AL592309.1-201ENST00000443127 649 ntBASIC18.97■□□□□ 0.63
TIMP1P01033 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TIMP1P01033 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TIMP1P01033 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.97■□□□□ 0.63
TIMP1P01033 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
TIMP1P01033 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.97■□□□□ 0.63
TIMP1P01033 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TIMP1P01033 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.97■□□□□ 0.63
TIMP1P01033 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIMP1P01033 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.97■□□□□ 0.63
TIMP1P01033 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIMP1P01033 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms