Protein–RNA interactions for Protein: O95777

LSM8, U6 snRNA-associated Sm-like protein LSm8, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8O95777 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.67■□□□□ 0.58
LSM8O95777 AL023806.1-201ENST00000603994 1649 ntBASIC18.67■□□□□ 0.58
LSM8O95777 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM8O95777 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LSM8O95777 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM8O95777 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LSM8O95777 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM8O95777 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 MIR1224-201ENST00000408193 85 ntBASIC18.66■□□□□ 0.58
LSM8O95777 AC103564.2-201ENST00000432853 1299 ntBASIC18.66■□□□□ 0.58
LSM8O95777 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.66■□□□□ 0.58
LSM8O95777 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 AL139327.4-201ENST00000612362 153 ntBASIC18.66■□□□□ 0.58
LSM8O95777 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM8O95777 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.66■□□□□ 0.58
LSM8O95777 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.66■□□□□ 0.58
LSM8O95777 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.66■□□□□ 0.58
LSM8O95777 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM8O95777 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.66■□□□□ 0.58
LSM8O95777 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM8O95777 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM8O95777 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LSM8O95777 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM8O95777 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM8O95777 AL645608.8-201ENST00000606034 2086 ntBASIC18.65■□□□□ 0.58
LSM8O95777 AC141586.5-201ENST00000624546 2050 ntBASIC18.65■□□□□ 0.58
LSM8O95777 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 AC139713.2-201ENST00000641328 2723 ntBASIC18.65■□□□□ 0.58
LSM8O95777 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.65■□□□□ 0.58
LSM8O95777 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LSM8O95777 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.65■□□□□ 0.58
LSM8O95777 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LSM8O95777 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LSM8O95777 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.65■□□□□ 0.58
LSM8O95777 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LSM8O95777 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LSM8O95777 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
LSM8O95777 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.65■□□□□ 0.58
LSM8O95777 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
LSM8O95777 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
LSM8O95777 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.65■□□□□ 0.58
LSM8O95777 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.65■□□□□ 0.58
LSM8O95777 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.65■□□□□ 0.58
LSM8O95777 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 AC011467.2-201ENST00000598425 242 ntBASIC18.65■□□□□ 0.58
LSM8O95777 NPAP1P7-201ENST00000613027 823 ntBASIC18.65■□□□□ 0.58
LSM8O95777 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.65■□□□□ 0.58
LSM8O95777 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 LYSMD4-203ENST00000378904 2122 ntBASIC18.65■□□□□ 0.58
LSM8O95777 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LSM8O95777 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM8O95777 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
LSM8O95777 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LSM8O95777 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
LSM8O95777 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LSM8O95777 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LSM8O95777 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LSM8O95777 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.64■□□□□ 0.57
LSM8O95777 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM8O95777 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM8O95777 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.64■□□□□ 0.57
LSM8O95777 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
LSM8O95777 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM8O95777 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM8O95777 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LSM8O95777 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
LSM8O95777 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms