Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.84■□□□□ 0.77
GGPS1O95749 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.84■□□□□ 0.77
GGPS1O95749 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GGPS1O95749 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GGPS1O95749 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
GGPS1O95749 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GGPS1O95749 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.84■□□□□ 0.77
GGPS1O95749 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
GGPS1O95749 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.83■□□□□ 0.77
GGPS1O95749 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.83■□□□□ 0.77
GGPS1O95749 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.83■□□□□ 0.77
GGPS1O95749 AP000997.3-201ENST00000623333 2250 ntBASIC19.83■□□□□ 0.77
GGPS1O95749 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GGPS1O95749 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.83■□□□□ 0.77
GGPS1O95749 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
GGPS1O95749 LETM1P2-201ENST00000597330 2178 ntBASIC19.83■□□□□ 0.77
GGPS1O95749 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GGPS1O95749 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GGPS1O95749 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.83■□□□□ 0.77
GGPS1O95749 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
GGPS1O95749 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
GGPS1O95749 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.83■□□□□ 0.77
GGPS1O95749 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.83■□□□□ 0.77
GGPS1O95749 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GGPS1O95749 PRYP5-201ENST00000451909 266 ntBASIC19.83■□□□□ 0.77
GGPS1O95749 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.83■□□□□ 0.77
GGPS1O95749 AC034105.1-201ENST00000563488 319 ntBASIC19.83■□□□□ 0.77
GGPS1O95749 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.83■□□□□ 0.77
GGPS1O95749 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.83■□□□□ 0.77
GGPS1O95749 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GGPS1O95749 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GGPS1O95749 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
GGPS1O95749 AC132938.5-201ENST00000624980 1813 ntBASIC19.83■□□□□ 0.76
GGPS1O95749 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
GGPS1O95749 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GGPS1O95749 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GGPS1O95749 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GGPS1O95749 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GGPS1O95749 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GGPS1O95749 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GGPS1O95749 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GGPS1O95749 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.82■□□□□ 0.76
GGPS1O95749 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.82■□□□□ 0.76
GGPS1O95749 PMS2P7-201ENST00000506558 1336 ntBASIC19.82■□□□□ 0.76
GGPS1O95749 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GGPS1O95749 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GGPS1O95749 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GGPS1O95749 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GGPS1O95749 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.82■□□□□ 0.76
GGPS1O95749 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.82■□□□□ 0.76
GGPS1O95749 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GGPS1O95749 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.82■□□□□ 0.76
GGPS1O95749 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.82■□□□□ 0.76
GGPS1O95749 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GGPS1O95749 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.82■□□□□ 0.76
GGPS1O95749 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GGPS1O95749 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.82■□□□□ 0.76
GGPS1O95749 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.82■□□□□ 0.76
GGPS1O95749 Z83851.2-201ENST00000609564 659 ntBASIC19.82■□□□□ 0.76
GGPS1O95749 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.82■□□□□ 0.76
GGPS1O95749 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GGPS1O95749 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GGPS1O95749 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GGPS1O95749 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GGPS1O95749 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
GGPS1O95749 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
GGPS1O95749 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
GGPS1O95749 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
GGPS1O95749 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.82■□□□□ 0.76
GGPS1O95749 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.82■□□□□ 0.76
GGPS1O95749 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GGPS1O95749 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
GGPS1O95749 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
GGPS1O95749 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.81■□□□□ 0.76
GGPS1O95749 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GGPS1O95749 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.81■□□□□ 0.76
GGPS1O95749 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GGPS1O95749 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.81■□□□□ 0.76
GGPS1O95749 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GGPS1O95749 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
GGPS1O95749 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GGPS1O95749 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.81■□□□□ 0.76
GGPS1O95749 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GGPS1O95749 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GGPS1O95749 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.81■□□□□ 0.76
GGPS1O95749 AL020989.1-201ENST00000422979 469 ntBASIC19.81■□□□□ 0.76
GGPS1O95749 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.81■□□□□ 0.76
GGPS1O95749 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.81■□□□□ 0.76
GGPS1O95749 AC019129.2-201ENST00000609837 1235 ntBASIC19.81■□□□□ 0.76
GGPS1O95749 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.81■□□□□ 0.76
GGPS1O95749 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.81■□□□□ 0.76
GGPS1O95749 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GGPS1O95749 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.81■□□□□ 0.76
GGPS1O95749 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GGPS1O95749 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GGPS1O95749 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GGPS1O95749 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GGPS1O95749 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GGPS1O95749 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
GGPS1O95749 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms