Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CSPG5O95196 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CSPG5O95196 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSPG5O95196 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CSPG5O95196 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSPG5O95196 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CSPG5O95196 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CSPG5O95196 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CSPG5O95196 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.98■□□□□ 0.63
CSPG5O95196 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG5O95196 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CSPG5O95196 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.98■□□□□ 0.63
CSPG5O95196 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG5O95196 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG5O95196 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.98■□□□□ 0.63
CSPG5O95196 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG5O95196 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CSPG5O95196 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG5O95196 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.98■□□□□ 0.63
CSPG5O95196 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.98■□□□□ 0.63
CSPG5O95196 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.98■□□□□ 0.63
CSPG5O95196 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.98■□□□□ 0.63
CSPG5O95196 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CSPG5O95196 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.98■□□□□ 0.63
CSPG5O95196 MIR4469-201ENST00000583919 79 ntBASIC18.98■□□□□ 0.63
CSPG5O95196 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG5O95196 AL078644.1-201ENST00000609881 752 ntBASIC18.98■□□□□ 0.63
CSPG5O95196 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.98■□□□□ 0.63
CSPG5O95196 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG5O95196 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG5O95196 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CSPG5O95196 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.98■□□□□ 0.63
CSPG5O95196 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.98■□□□□ 0.63
CSPG5O95196 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG5O95196 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG5O95196 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG5O95196 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.98■□□□□ 0.63
CSPG5O95196 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG5O95196 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSPG5O95196 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG5O95196 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG5O95196 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG5O95196 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.97■□□□□ 0.63
CSPG5O95196 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG5O95196 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.97■□□□□ 0.63
CSPG5O95196 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG5O95196 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CSPG5O95196 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.97■□□□□ 0.63
CSPG5O95196 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.97■□□□□ 0.63
CSPG5O95196 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.97■□□□□ 0.63
CSPG5O95196 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.97■□□□□ 0.63
CSPG5O95196 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CSPG5O95196 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG5O95196 AC106028.4-201ENST00000614509 607 ntBASIC18.97■□□□□ 0.63
CSPG5O95196 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CSPG5O95196 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.97■□□□□ 0.63
CSPG5O95196 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG5O95196 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG5O95196 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.97■□□□□ 0.63
CSPG5O95196 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CSPG5O95196 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG5O95196 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG5O95196 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG5O95196 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG5O95196 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSPG5O95196 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG5O95196 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CSPG5O95196 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CSPG5O95196 AC079776.2-201ENST00000641154 1609 ntBASIC18.96■□□□□ 0.63
CSPG5O95196 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG5O95196 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG5O95196 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG5O95196 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CSPG5O95196 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG5O95196 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CSPG5O95196 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG5O95196 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG5O95196 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.96■□□□□ 0.63
CSPG5O95196 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.96■□□□□ 0.63
CSPG5O95196 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.96■□□□□ 0.63
CSPG5O95196 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG5O95196 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG5O95196 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.96■□□□□ 0.63
CSPG5O95196 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.96■□□□□ 0.63
CSPG5O95196 AC092865.6-201ENST00000642101 219 ntBASIC18.96■□□□□ 0.63
CSPG5O95196 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG5O95196 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG5O95196 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
CSPG5O95196 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CSPG5O95196 AC010460.3-201ENST00000511359 1579 ntBASIC18.96■□□□□ 0.63
CSPG5O95196 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG5O95196 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG5O95196 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG5O95196 SIRPAP1-201ENST00000448467 1770 ntBASIC18.96■□□□□ 0.63
CSPG5O95196 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG5O95196 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CSPG5O95196 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG5O95196 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSPG5O95196 AC007613.1-201ENST00000572811 2597 ntBASIC18.95■□□□□ 0.62
CSPG5O95196 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms