Protein–RNA interactions for Protein: O75317

USP12, Ubiquitin carboxyl-terminal hydrolase 12, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP12O75317 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.12■□□□□ 0.49
USP12O75317 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP12O75317 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP12O75317 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP12O75317 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.12■□□□□ 0.49
USP12O75317 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.12■□□□□ 0.49
USP12O75317 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.12■□□□□ 0.49
USP12O75317 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP12O75317 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.12■□□□□ 0.49
USP12O75317 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP12O75317 AC139713.2-201ENST00000641328 2723 ntBASIC18.12■□□□□ 0.49
USP12O75317 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP12O75317 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP12O75317 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
USP12O75317 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.11■□□□□ 0.49
USP12O75317 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP12O75317 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
USP12O75317 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP12O75317 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.11■□□□□ 0.49
USP12O75317 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.11■□□□□ 0.49
USP12O75317 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP12O75317 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP12O75317 AC004870.1-201ENST00000315132 882 ntBASIC18.11■□□□□ 0.49
USP12O75317 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP12O75317 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP12O75317 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.11■□□□□ 0.49
USP12O75317 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
USP12O75317 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.11■□□□□ 0.49
USP12O75317 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.11■□□□□ 0.49
USP12O75317 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP12O75317 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.11■□□□□ 0.49
USP12O75317 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.11■□□□□ 0.49
USP12O75317 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP12O75317 AC009154.2-201ENST00000621177 724 ntBASIC18.11■□□□□ 0.49
USP12O75317 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.11■□□□□ 0.49
USP12O75317 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP12O75317 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP12O75317 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.11■□□□□ 0.49
USP12O75317 Z83836.1-201ENST00000624605 1642 ntBASIC18.11■□□□□ 0.49
USP12O75317 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP12O75317 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP12O75317 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP12O75317 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.11■□□□□ 0.49
USP12O75317 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
USP12O75317 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
USP12O75317 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP12O75317 AC012313.1-201ENST00000593393 3059 ntBASIC18.11■□□□□ 0.49
USP12O75317 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.1■□□□□ 0.49
USP12O75317 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.1■□□□□ 0.49
USP12O75317 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.1■□□□□ 0.49
USP12O75317 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
USP12O75317 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.1■□□□□ 0.49
USP12O75317 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP12O75317 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP12O75317 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP12O75317 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP12O75317 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
USP12O75317 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.1■□□□□ 0.49
USP12O75317 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP12O75317 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP12O75317 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP12O75317 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP12O75317 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP12O75317 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.1■□□□□ 0.49
USP12O75317 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP12O75317 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.1■□□□□ 0.49
USP12O75317 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
USP12O75317 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.1■□□□□ 0.49
USP12O75317 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP12O75317 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP12O75317 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
USP12O75317 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP12O75317 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP12O75317 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.1■□□□□ 0.49
USP12O75317 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP12O75317 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP12O75317 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP12O75317 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.09■□□□□ 0.49
USP12O75317 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP12O75317 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP12O75317 AC016734.2-201ENST00000624325 1377 ntBASIC18.09■□□□□ 0.49
USP12O75317 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP12O75317 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP12O75317 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP12O75317 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.09■□□□□ 0.49
USP12O75317 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP12O75317 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP12O75317 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
USP12O75317 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.09■□□□□ 0.49
USP12O75317 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
USP12O75317 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.09■□□□□ 0.49
USP12O75317 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.09■□□□□ 0.49
USP12O75317 AL390719.2-201ENST00000606993 987 ntBASIC18.09■□□□□ 0.49
USP12O75317 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP12O75317 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP12O75317 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.09■□□□□ 0.49
USP12O75317 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
USP12O75317 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP12O75317 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.09■□□□□ 0.49
USP12O75317 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms